LOCUS AK314013 880 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ94669, highly similar to Homo sapiens
survival motor neuron domain containing 1 (SMNDC1), mRNA.
ACCESSION AK314013
VERSION AK314013.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 880)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..880
/clone="TESTI2039340"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000432879"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 164..880
/note="highly similar to Homo sapiens survival motor
neuron domain containing 1 (SMNDC1), mRNA"
/protein_id="BAG36724.1"
/translation="MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIE
LTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENG
TAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKK
AQRIKELEQEREDRKVKWQQFNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIAD
KPMTQYQDTSKYNVRHLMPQ"
BASE COUNT 287 a 196 c 205 g 192 t
ORIGIN
1 tccccctcgc cgccgaccga gttcttcctt ttcagaccgg gtcgccttgc tgtcgtcgcg
61 gtgattttcc tgctactgct actgctgctg ctgccaccgc cactaccact gggctcattt
121 gccccgaccc cttcccgccg ccccgccccc agccccacac aagatgtcag aggatttagc
181 aaagcagctg gcaagctaca aagctcagct ccagcaagtt gaagctgcat tatctggaaa
241 tggagaaaat gaagatttgc taaaattgaa gaaagattta caagaagtta tagaactaac
301 caaagacctt ctgtcaactc aaccttctga gacgcttgca agttcagaca gttttgcttc
361 tactcaacct actcattcat ggaaagtagg agacaagtgt atggcagtct ggagtgaaga
421 tggacagtgt tatgaagcgg agattgagga gatagatgaa gaaaatggca ccgctgcaat
481 cacctttgct ggttatggca atgctgaagt gactccactg ttgaacctca agcctgtaga
541 agaaggaagg aaggcaaagg aggacagtgg caacaaaccc atgtcaaaaa aagaaatgat
601 tgcccagcag cgtgaatata aaaagaagaa agctttgaaa aaagctcaga gaataaaaga
661 acttgagcag gaaagagagg accggaaagt gaaatggcaa caattcaaca acagagccta
721 ttctaaaaac aaaaaaggcc aggtaaagag gagtattttt gcttcacctg agagtgtgac
781 tggtaaagtt ggagtaggaa cctgtggaat tgctgataaa cctatgacac aatatcaaga
841 tacctctaaa tacaatgtca ggcatttgat gcctcaataa
//