LOCUS AK313957 1133 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ94603, highly similar to Homo sapiens
parvin, beta (PARVB), mRNA.
ACCESSION AK313957
VERSION AK313957.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1133)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1133
/clone="TCOLN2002218"
/clone_lib="TCOLN2"
/db_xref="H-InvDB:HIT000432823"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="colon, tumor tissue"
CDS 39..1133
/note="highly similar to Homo sapiens parvin, beta
(PARVB), mRNA"
/protein_id="BAG36673.1"
/translation="MSSAPRSPTPRPRRMKKDESFLGKLGGTLARKRRAREVSDLQEE
GKNAINSPMSPALADVHPEDTQLEENEERTMIDPTSKEDPKFKELVKVLLDWINDVLV
EERIIVKQLEEDLYDGQVLQKLLEKLAGCKLNVAEVTQSEIGQKQKLQTVLEAVHDLL
RPRGWALRWSVDSIHGKNLVAILHLLVSLAMHFRAPIRLPEHVTVQVVVVRKREGLLH
SSHISEELTTTTEMMMGRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVT
ELETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQKVHNVSFAFELMLDGGLKKP
KARPEDVVNLDLKSTLRVLYNLFTKYKNVE"
BASE COUNT 257 a 323 c 342 g 211 t
ORIGIN
1 acacgcgctg cgcccgccgc cggccccacg cgcggcccat gtcctccgcg ccgcgctcgc
61 ccaccccgcg gccccgcagg atgaagaagg acgagtcgtt cctgggcaag ctgggcggca
121 ccctggccag gaagcggagg gcgcgcgagg tgagtgacct gcaggaagaa ggcaagaatg
181 ccatcaactc accgatgtcc cccgccctgg cggatgttca ccctgaagac acccagcttg
241 aggagaacga ggagcgcacg atgattgacc ccacttccaa ggaagacccc aagttcaagg
301 aactggtcaa ggtcctcctc gactggatta atgacgtgct ggtggaggag aggatcattg
361 tgaagcagct ggaggaagac ctgtatgacg gccaggtgct gcagaagctc ttggaaaaac
421 tggcagggtg caagctgaat gtggctgagg tgacacagtc cgaaataggg cagaaacaga
481 agctgcagac ggtgctggaa gcagtacatg acctgctgcg gccccgaggc tgggcgctcc
541 ggtggagcgt ggactcaatt cacgggaaga acctggtggc catcctccac ctgctggtct
601 ctctggccat gcacttcagg gcccccatcc gccttcctga gcatgtaacg gtgcaggtgg
661 tggtcgtgcg gaaacgggaa ggcctgctgc attccagcca catctcggag gagctgacca
721 caactacaga gatgatgatg ggccggttcg agcgggatgc cttcgacacg ctgttcgacc
781 acgccccgga taagctcagc gtggtgaaga agtctctcat cacttttgtg aacaagcacc
841 tgaacaagct gaatttggag gtgacggaac tggagaccca gtttgcagat ggcgtgtacc
901 tggttctgct catgggcctt ctggaagact actttgttcc tctccaccac ttctacctga
961 ctccggaaag cttcgatcag aaggtccaca atgtgtcctt cgcctttgag ctgatgctgg
1021 acggaggcct caagaaaccc aaggctcgtc ctgaagacgt ggttaacttg gacctcaaat
1081 ccaccctgag ggttctttac aacctgttca ccaagtacaa gaacgtggag tga
//