LOCUS AK313674 1597 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ94260, Homo sapiens retinal outer segment
membrane protein 1 (ROM1), mRNA.
ACCESSION AK313674
VERSION AK313674.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1597)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1597
/clone="BRSSN2016277"
/clone_lib="BRSSN2"
/db_xref="H-InvDB:HIT000432540"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="substantia nigra"
CDS 542..1597
/note="Homo sapiens retinal outer segment membrane
protein 1 (ROM1), mRNA"
/protein_id="BAG36425.1"
/translation="MAPVLPLVLPLQPRIRLAQGLWLLSWLLALAGGVILLCSGHLLV
QLRHLGTFLAPSCQFPVLPQAALAAGAVALGTGLVGVGASRASLNAALYPPWRGVLGP
LLVAGTAGGGGLLVVALGLALALPGSLDEALEEGLVTALAHYKDTEVPGHCQAKRLVD
ELQLRYHCCGRHGYKDWFGVQWVSSRYLDPGDRDVADRIQSNVEGLYLTDGVPFSCCN
PHSPRPCLQNRLSDSYAHPLFDPRQPNQNLWAQGCHEVLLEHLQDLAGTLGSMLAVTF
LLQALVLLGLRYLQTALEGLGGVIDAGGETQGYLFPSGLKDMLKTAWLQGGVACRPAP
EEAPPGEAPPKEDLSEA"
BASE COUNT 259 a 509 c 541 g 288 t
ORIGIN
1 aaaaacaggc gccggacgcg gagccgccag gaagcgcggg agggggggcg ggcccgaggg
61 ggggccgggc cgcttggtaa cccctccctg tccgggcctc gccgctcagt acgggggcgg
121 ggctagccgg ctgaccccct ggcctactcc cggcctccgg ctccaggccc ttcccggatc
181 cccgcccccg gattcccagg ggacggggaa ggtagcgccc gccccgatat ctccgccccc
241 cagcccctaa cccctcaggg ttgagcggac caaccccacc acttccgcga ggggcagggg
301 cggggtcaca aaacgggccc tcggcctagg ggcggagttt ctcgtaaggg gcaaggccaa
361 ggcatcttgt attggggctg acaggggggc gggttattag ggctgaggat gggaggatgc
421 tcagggtatt ggggtcaggg tggcattagc ccagctcaag ccgggccggg ctgactcagc
481 atcctgcccc agccagcttc catccctgac acctctgcac tcccttgggc agagatggga
541 gatggcgccg gtgttgcccc tggtgctgcc cctgcagccc cgcatccgcc tggcacaagg
601 gctctggctc ctctcctggc tgctggcgct ggctggtggc gtcatcctcc tctgtagtgg
661 gcacctcctg gtccagctaa ggcaccttgg caccttcctg gctccctcct gtcagttccc
721 tgtcctgccc caggctgccc tggcagcggg cgcggtggct ctgggcacag gactagtggg
781 tgtaggagcc agccgggcaa gtctgaatgc agctctatac cctccctggc gaggggtcct
841 gggcccgctg ctggtggctg gcacggctgg tggggggggg ctcctggtcg tcgccctcgg
901 gctagccctg gctttgcctg ggagtctgga tgaggcgctg gaggagggcc tggtgactgc
961 cttggctcac tacaaggaca cagaggtgcc tgggcactgt caggccaaaa ggctggtgga
1021 tgagctgcaa ctgaggtacc actgctgcgg gcgccacggg tacaaggatt ggtttggggt
1081 ccagtgggtc agcagccgtt acctggatcc cggtgaccgg gatgtggctg accggatcca
1141 gagcaatgta gaaggcctat acctgactga tggggtccct ttctcctgtt gcaaccccca
1201 ctcaccccgc ccttgcctgc aaaaccgtct ttcagactcc tacgcccacc ccctgttcga
1261 tccccgacaa cccaaccaaa acctctgggc ccaagggtgc catgaggtgc tgctggagca
1321 cttgcaggac ttggcaggca cactgggtag catgctggct gtcaccttcc tactgcaggc
1381 tctggtgctc cttggcctgc ggtacctgca aacagcactg gaggggcttg gaggggtcat
1441 tgatgcggga ggagagaccc agggctatct ctttcccagt gggctgaaag atatgctgaa
1501 aacagcatgg ctacagggag gggttgcctg caggccagca cctgaggagg ccccaccagg
1561 agaagcacct cccaaggagg atctatctga ggcctag
//