LOCUS AK313576 1850 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ94140, highly similar to Homo sapiens
U2(RNU2) small nuclear RNA auxillary factor 1-like 1(U2AF1L1),
mRNA.
ACCESSION AK313576
VERSION AK313576.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1850)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1850
/clone="SMINT2018902"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000432442"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 411..1850
/note="highly similar to Homo sapiens U2(RNU2) small
nuclear RNA auxillary factor 1-like 1(U2AF1L1), mRNA"
/protein_id="BAG36348.1"
/translation="MAALEKMTFPKKMTFPEKPSHKKYRAALKKEKRKKRRQELARLR
DSGLSQEEEEDTFIEEQQLEEEKLLERERERLHEEWLLREQKAQEEFRIKKEKEEAAK
KWLEEQERKLKEQWKEQQRKEREEEEQKQQEKEEKEEAVQKMLDQAENDLENSTTWQN
PEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRRHNFPTSSPTLLIKSMFTTFGMEQ
CRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVY
VQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFL
HVFRNPNNEFWEANRDIYLSSDQTGSSFGKNSERREKMGHHDHYYSRQRGRRNPSPDH
TYKRNGESERKKSSHRGKKSHKRTSKSRERHNSPSRGRNRHRSWDQGRRSQSRRSHRS
RSQSSSRCRSRGRRKSGNRDRTVQSPQSK"
BASE COUNT 612 a 372 c 512 g 354 t
ORIGIN
1 agagccgggt tcctcccggg tttctgccgg gtttctccct gcggctcctg ggttgttgag
61 actcttgtga agatggcttg cgctgccgcg cggtccccgg ccgaccagga caggtttatt
121 tgtatctatc ctgcttattt aaataataag aagaccatcg cagagggaag gcgaatcccc
181 ataagtaagg ctgttgaaaa tcctacagct acagagattc aagatgtatg ttcagcagtt
241 ggacttaacg tatttcttga gaaaaataaa atgtactcta gagaatggaa tcgtgatgtc
301 caatacagag gcagagtccg ggtccagctc aaacaggaag atgggagcct ctgccttgta
361 cagttcccat cacgttaaga atgtctgagg ggtcaggcgg tgctggcaag atggctgcac
421 ttgagaagat gacgtttccc aagaagatga catttccaga gaaaccaagc cacaaaaagt
481 acagggccgc cctgaagaag gagaaacgaa agaaacgtcg gcaggaactt gctcgactga
541 gagactcagg actctcacag gaggaggaag aggacacttt tattgaagaa caacaactag
601 aagaagagaa gctattggaa agagagaggg aaagattaca tgaggagtgg ttgctgaggg
661 agcagaaggc acaagaagaa ttcagaataa agaaggaaaa ggaagaggcg gctaaaaaat
721 ggctagaaga acaagagaga aagttaaagg aacaatggaa agaacagcag aggaaagaga
781 gagaagagga ggagcagaaa caacaggaga aggaagaaaa agaggaagct gtgcagaaga
841 tgctggatca ggctgaaaat gatttagaaa atagtaccac atggcaaaac ccagaaccac
901 ccgtggattt cagagtaatg gagaaggatc gagctaattg tcccttctac agtaaaacag
961 gagcttgcag atttggagac agatgttcac gtagacataa tttcccaaca tctagtccta
1021 cccttcttat taagagcatg tttacaacgt ttggaatgga gcagtgcagg agggatgact
1081 atgaccctga cgcaagcctg gagtacagcg aggaagaaac ctaccaacag ttcctagatt
1141 tctatgagga tgtgttgccc gagttcaaga acgtggggaa agtgattcag ttcaaggtca
1201 gctgcaattt ggaacctcac ctgaggggca atgtatatgt tcagtaccag tcggaagaag
1261 aatgccaagc agccctttct ctgtttaacg gacgatggta tgcaggacga cagctgcaat
1321 gtgaattctg cccagtgacc cggtggaaaa tggcgatttg tggtttattt gaaatacaac
1381 aatgtccaag aggaaaacac tgcaactttc ttcatgtgtt cagaaatccc aacaatgaat
1441 tctgggaagc taatagagac atctacttgt cttcagatca gactggctcc tcctttggca
1501 agaactccga gaggagggag aagatgggcc accacgacca ctactacagc aggcagcggg
1561 gaaggagaaa ccctagtcca gaccacacct acaaaagaaa tggggaatcc gagagaaaaa
1621 agagtagtca tagggggaag aaatctcaca aacgcacatc aaagagtcgg gagaggcaca
1681 attcaccaag cagaggaaga aataggcacc gcagctggga ccagggccgc cggagccaga
1741 gccgcaggag ccaccgcagc cggagccaaa gttcctctag gtgccgaagt cgtgggagga
1801 ggaagtcggg taatagagac agaactgttc agagtcccca atccaaataa
//