LOCUS AK313551 782 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ94111, Homo sapiens major histocompatibility
complex, class II, DO alpha (HLA-DOA), mRNA.
ACCESSION AK313551
VERSION AK313551.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 782)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..782
/cell_type="peripheral blood mononuclear cells
(HPBMC5939)"
/clone="PEBLM2004856"
/clone_lib="PEBLM2"
/db_xref="H-InvDB:HIT000432417_05"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, peripheral blood mononuclear
cells"
/organism="Homo sapiens"
CDS 30..782
/note="Homo sapiens major histocompatibility complex,
class II, DO alpha (HLA-DOA), mRNA"
/protein_id="BAG36327.1"
/translation="MALRAGLVLGFHTLMTLLSPQEAGATKADHMGSYGPAFYQSYGA
SGQFTHEFDEEQLFSVDLKKSEAVWRLPEFGDFARFDPQGGLAGIAAIKAHLDILVER
SNRSRAINVPPRVTVLPKSRVELGQPNILICIVDNIFPPVINITWLRNGQTVTEGVAQ
TSFYSQPDHLFRKFHYLPFVPSAEDVYDCQVEHWGLDAPLLRHWELQVPIPPPDAMET
LVCALGLAIGLVGFLVGTVLIIMGTYVSSVPR"
BASE COUNT 146 a 256 c 219 g 161 t
ORIGIN
1 gactgatttg attaaagcac cagagtgtaa tggccctcag agcagggctg gtcctggggt
61 tccacaccct gatgaccctc ctgagcccgc aggaggcagg ggccaccaag gctgaccaca
121 tgggctccta cggacccgcc ttctaccagt cttacggcgc ctcgggccag ttcacccatg
181 aatttgatga ggaacagctg ttctctgtgg acctgaagaa aagcgaggcc gtgtggcgtc
241 tgcctgagtt tggtgacttt gcccgctttg acccgcaggg cgggctggcc ggcatcgccg
301 caatcaaagc ccatctggac atcctggtgg agcgctccaa ccgcagcaga gccatcaacg
361 tgcctccacg ggtgaccgtg ctccccaagt ctcgggtgga gctgggccag cccaacatcc
421 tcatctgcat cgtggacaac atcttccccc ctgtgatcaa tatcacctgg ctgcgcaacg
481 gccaaactgt cactgaggga gtggcccaga ccagcttcta ttcccagcct gaccatttgt
541 tccgcaagtt ccactacctg cccttcgtgc cctcagccga ggacgtctat gactgccagg
601 tggagcactg gggcctggat gcgccactcc tcaggcattg ggagctccag gtgcctattc
661 caccaccaga tgccatggag accctggtct gtgccctggg cctggccatc ggcctggtgg
721 gcttcctcgt gggcaccgtc ctcatcatca tgggcacata tgtgtccagt gtccccaggt
781 aa
//