LOCUS AK313115 1181 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93600, highly similar to Homo sapiens
left-right determination factor 1 (LEFTY1), mRNA.
ACCESSION AK313115
VERSION AK313115.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1181)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1181
/clone="COLON2005958"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000431981"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 81..1181
/note="highly similar to Homo sapiens left-right
determination factor 1 (LEFTY1), mRNA"
/protein_id="BAG35937.1"
/translation="MQPLWLCWALWVLPLASPGAALTGEQLLGSLLRQLQLKEVPTLD
RADMEELVIPTHVRAQYVALLQRSHGDRSRGKRFSQSFREVAGRFLASEASTHLLVFG
MEQRLPPNSELVQAVLRLFQEPVPKAALHRHGRLSPRSAQARVTVEWLRVRDDGSNRT
SLIDSRLVSVHESGWKAFDVTEAVNFWQQLSRPRQPLLLQVSVQREHLGPLASGAHKL
VRFASQGAPAGLGEPQLELHTLDLGDYGAQGDCDPEAPMTEGTRCCRQEMYIDLQGMK
WAENWVLEPPGFLAYECVGTCRQPPEALAFKWPFLGPRQCIASETDSLPMIVSIKEGG
RTRPQVVSLPNMRVQKCSCASDGALVPRRLQP"
BASE COUNT 187 a 404 c 408 g 182 t
ORIGIN
1 acatccagct gcctgagacc ctcctgcagc cttctcaagg gacagcccca ctctgcctct
61 tgctcctcca gggcagcacc atgcagcccc tgtggctctg ctgggcactc tgggtgttgc
121 ccctggccag ccccggggcc gccctgaccg gggagcagct cctgggcagc ctgctgcggc
181 agctgcagct caaagaggtg cccaccctgg acagggccga catggaggag ctggtcatcc
241 ccacccacgt gagggcccag tacgtggccc tgctgcagcg cagccacggg gaccgctccc
301 gcggaaagag gttcagccag agcttccgag aggtggccgg caggttcctg gcgtcggagg
361 ccagcacaca cctgctggtg ttcggcatgg agcagcggct gccgcccaac agcgagctgg
421 tgcaggccgt gctgcggctc ttccaggagc cggtccccaa ggccgcgctg cacaggcacg
481 ggcggctgtc cccgcgcagc gcccaggccc gggtgaccgt cgagtggctg cgcgtccgcg
541 acgacggctc caaccgcacc tccctcatcg actccaggct ggtgtccgtc cacgagagcg
601 gctggaaggc cttcgacgtg accgaggccg tgaacttctg gcagcagctg agccggcccc
661 ggcagccgct gctgctacag gtgtcggtgc agagggagca tctgggcccg ctggcgtccg
721 gcgcccacaa gctggtccgc tttgcctcgc agggggcgcc agccgggctt ggggagcccc
781 agctggagct gcacaccctg gaccttgggg actatggagc tcagggcgac tgtgaccctg
841 aagcaccaat gaccgagggc acccgctgct gccgccagga gatgtacatt gacctgcagg
901 ggatgaagtg ggccgagaac tgggtgctgg agcccccggg cttcctggct tatgagtgtg
961 tgggcacctg ccggcagccc ccggaggccc tggccttcaa gtggccgttt ctggggcctc
1021 gacagtgcat cgcctcggag actgactcgc tgcccatgat cgtcagcatc aaggagggag
1081 gcaggaccag gccccaggtg gtcagcctgc ccaacatgag ggtgcagaag tgcagctgtg
1141 cctcggatgg tgcgctcgtg ccaaggaggc tccagccata g
//