LOCUS AK313100 1598 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93585, highly similar to Homo sapiens PDZ
domain containing 1 (PDZK1), mRNA.
ACCESSION AK313100
VERSION AK313100.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1598)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1598
/clone="BRTHA2016926"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000431966"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 39..1598
/note="highly similar to Homo sapiens PDZ domain
containing 1 (PDZK1), mRNA"
/protein_id="BAG35924.1"
/translation="MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGHLVRVVEKCSPA
EKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKAVKTRVDL
KELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGKKGVYM
TDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKETDK
RHVEQKIQFKRETASLKLLPHQPRIVEMKKGSNGYGFYLRAGSEQKGQIIKDIDSGSP
AEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRKGGDQTSLLVVDKETDNMDRLAHFS
PFLYYQSQELPNGSVKEAPAPTPTSLEVSSPPDTTEEVDHKPKLCRLAKGENGYGFHL
NAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNV
TLLVCGKKAYDYFQAKKIPIVSSLADPLDTPPDSKEGIVVESNHDSHMAKERAHSTAS
HSSSNSEDTEM"
BASE COUNT 476 a 317 c 440 g 365 t
ORIGIN
1 agtgaacgaa cagagcagct cctcttccat ctccagaaat gacctccacc ttcaaccccc
61 gagaatgtaa actgtccaag caagaagggc aaaactatgg cttcttcctg cgaattgaga
121 aggacaccga gggccacctg gtccgggtgg ttgagaagtg tagcccagca gagaaggctg
181 gccttcaaga tggagacaga gttcttagga tcaatggtgt ctttgtggac aaagaagaac
241 atatgcaggt tgtggatctg gtcagaaaga gtgggaattc agtgacttta ctagttctgg
301 atggggattc ctatgagaaa gcagtgaaaa cacgggtgga cttgaaagag ttgggtcaaa
361 gtcagaagga gcaaggtttg agtgataata tactttcccc tgtgatgaat ggaggtgtgc
421 aaacttggac ccagccccgg ctctgctatc tcgtgaagga aggaggcagc tatggcttct
481 ctctgaaaac tgtccaaggt aaaaaggggg tgtacatgac tgatattaca cctcaaggtg
541 tggctatgag agctggagtt ctggctgatg atcacttgat tgaagtgaat ggagagaatg
601 tagaggatgc cagccatgag gaagtggttg aaaaggtgaa gaagtcagga agccgtgtca
661 tgttcctgct ggtggacaaa gaaactgaca agcgtcatgt tgagcagaag atacaattca
721 aaagagaaac agccagtttg aaactgttac cccaccagcc ccgaattgtg gagatgaaga
781 aaggaagcaa tggctatggt ttctatctga gggcaggctc agaacagaaa ggtcaaatca
841 tcaaggacat agattctgga agtccagcag aggaggctgg cttgaagaac aatgatctgg
901 tagttgctgt caacggcgag tctgtggaaa ccctggatca tgacagtgtg gtagaaatga
961 ttagaaaggg tggagatcag acttcactgt tggtggtaga caaagagacg gacaacatgg
1021 acagactggc tcatttttct ccatttctct actatcaaag tcaagaactg cccaatggct
1081 ctgtcaagga ggctccagct cctactccca cttctctgga agtctcaagt ccaccagata
1141 ctacagagga agtagatcat aagcctaaac tctgcaggct ggctaaaggt gaaaatggct
1201 atggctttca cttaaatgcg attcggggtc tgccaggctc attcatcaaa gaggtacaga
1261 agggcggtcc tgcagacttg gctgggctag aggatgagga tgtcatcatt gaagtgaatg
1321 gggtgaatgt gctagatgaa ccctatgaga aggtggtgga tagaatccag agcagtggga
1381 agaatgtcac acttctagtc tgtggaaaga aggcctatga ttatttccaa gctaagaaaa
1441 tccctattgt ttcctccctg gctgatccac ttgacacccc tccagattct aaagaaggaa
1501 tagtggtgga gtcaaaccat gactcgcaca tggcaaaaga acgggcccac agtacagcct
1561 cacattcttc ttccaattct gaagatacag agatgtga
//