LOCUS AK313084 3092 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93567, highly similar to Homo sapiens Rap
guanine nucleotide exchange factor (GEF) 4 (RAPGEF4), mRNA.
ACCESSION AK313084
VERSION AK313084.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3092)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3092
/clone="BRHIP3024832"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000431950"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 57..3092
/note="highly similar to Homo sapiens Rap guanine
nucleotide exchange factor (GEF) 4 (RAPGEF4), mRNA"
/protein_id="BAG35910.1"
/translation="MVAAHAAHSSSSAEWIACLDKRPLERSSEDVDIIFTRLKEVKAF
EKFHPNLLHQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAV
TICTLGIGTAFGESILDNTPRHATIVTRESSELLRIEQKDFKALWEKYRQYMAGLLAP
PYGVMETGSNNDRIPDKENTPLIEPHVPLRPANTITKVPSEKILRAGKILRNAILSRA
PHMIRDRKYHLKTYRQCCVGTELVDWMMQQTPCVHSRTQAVGMWQVLLEDGVLNHVDQ
EHHFQDKYLFYRFLDDEHEDAPLPTEEEKKECDEELQDTMLLLSQMGPDAHMRMILRK
PPGQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGT
SWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDK
EDFNRILRDVEANTVRLKEHDQDVLVLEKVPAGNRASNQGNSQPQQKYTVMSGTPEKI
LEHFLETIRLEATLNEATDSVLNDFIMMHCVFMPNTQLCPALVAHYHAQPSQGTEQEK
MDYALNNKRRVIRLVLQWAAMYGDLLQEDDVSMAFLEEFYVSVSDDARMIAALKEQLP
ELEKIVKQISEDAKAPQKKHKVLLQQFNTGDERAQKRQPIRGSDEVLFKVYCMDHTYT
TIRVPVATSVKEVISAVADKLGSGEGLIIVKMSSGGEKVVLKPNDVSVFTTLTINGRL
FACPREQFDSLTPLPEQEGPTVGTVGTFELMSSKDLAYQMTIYDWELFNCVHELELIY
HTFGRHNFKKTTANLDLFLRRFNEIQFWVVTEICLCSQLSKRVQLLKKFIKIAAHCKE
YKNLNSFFAIVMGLSNVAVSRLALTWEKLPSKFKKFYAEFESLMDPSRNHRAYRLTVA
KLEPPLIPFMPLLIKDMTFTHEGNKTFIDNLVNFEKMRMIANTARTVRYYRSQPFNPD
AAQANKNHQDVRSYVRQLNVIDNQRTLSQMSHRLEPRRP"
BASE COUNT 887 a 704 c 752 g 749 t
ORIGIN
1 gcagagcgag cgcgggaggt cgccgcagcc agggacaccg cgcgccgccg ctcaacatgg
61 tcgctgcgca cgctgcccat tcttcctcct ctgccgagtg gatcgcctgc ctggataaaa
121 gaccactgga gcgatccagc gaagatgtgg atataatctt cactcgactg aaagaagtta
181 aagcttttga gaaatttcac ccaaatctcc ttcatcagat ttgcttatgt ggttattatg
241 agaatctgga aaagggaata acattatttc gccagggtga tattggaaca aactggtatg
301 ctgtcctggc agggtctttg gatgttaaag tatctgagac cagcagtcac caggatgctg
361 tgaccatctg taccctggga attgggacgg cctttggaga gtccattctg gacaacacac
421 cccgccatgc aaccatcgtt accagggaga gcagtgaact gctccgcatc gagcagaagg
481 acttcaaggc actatgggag aaatatcgac agtatatggc aggacttctg gctcctcctt
541 atggtgttat ggaaacgggc tctaacaatg acaggattcc tgacaaggag aacacacctc
601 tcattgaacc tcacgttcct cttcgtcctg ctaacaccat taccaaggtc ccttcagaga
661 agatcctcag agctggaaaa attttacgaa atgccattct ctctcgagca cctcacatga
721 taagagatag aaaataccac ctaaagacat acagacaatg ctgtgtggga actgaactgg
781 tggactggat gatgcagcag acaccatgtg ttcactcccg gactcaagct gttggcatgt
841 ggcaagtcct gttagaagat ggtgttctca accacgtgga ccaggagcac catttccaag
901 acaaatattt attctatcga tttctggatg atgagcacga ggatgcccct ttgcctactg
961 aggaggagaa gaaggagtgt gatgaggagc tccaggacac catgctgctg ctgtcacaga
1021 tgggccccga cgcccacatg aggatgatcc ttcgcaaacc acctggccag aggactgtgg
1081 atgacctaga gattatctat gaggagcttc ttcatattaa agccttatcc catctttcta
1141 ccacagtgaa acgagagtta gcaggtgttc tcatttttga gtctcacgcc aaaggaggga
1201 ctgtgttgtt taaccagggg gaagaaggta cctcctggta cattattcta aaaggatcag
1261 tgaatgtagt catttacggc aagggtgtgg tctgcaccct gcatgaagga gatgacttcg
1321 gcaagttagc actagtgaat gatgccccac gagctgcctc tatcgtctta cgagaagata
1381 actgccattt cttaagagta gacaaggagg atttcaaccg gatcctaagg gacgtggagg
1441 cgaatacagt cagacttaaa gaacatgacc aagatgtctt ggtgctggag aaggtcccag
1501 cagggaacag agcttctaat caaggaaact cacagcctca gcaaaagtat actgtgatgt
1561 caggaacacc tgaaaaaatt ttagagcatt ttctagaaac aatacgcctt gaggcaactt
1621 taaatgaagc aacagattct gttttaaatg actttattat gatgcactgt gtttttatgc
1681 caaataccca gctttgcccg gcactggtgg cccactacca cgcacagcct tcacaaggta
1741 cagaacagga gaaaatggat tatgccctca acaataagag gcgagtcatc cgcctggttc
1801 tacagtgggc tgccatgtat ggagacctcc tgcaagagga tgacgtgtct atggccttcc
1861 tggaggagtt ttatgtatct gtatcagatg atgcccggat gattgctgcc ctcaaggagc
1921 aactgccaga gttggagaag attgtcaagc aaatctcaga agatgcaaag gcaccacaaa
1981 agaagcacaa ggttcttttg caacagttca atacgggcga tgagagagcc cagaagcgcc
2041 agcctatccg cggctctgat gaagttctgt ttaaggtcta ttgcatggac cacacctaca
2101 caaccattcg ggtgccagtg gccacttcgg tgaaggaagt catcagtgca gttgccgaca
2161 agctgggctc cggggagggc ctgatcatag tcaagatgag ttctggagga gaaaaggtgg
2221 tgctcaaacc taatgatgtt tcagtattta cgacgctcac cattaatgga cgcctgtttg
2281 cttgcccgcg agagcaattc gattcactga ctcccttacc agaacaggaa ggcccaactg
2341 ttggaacagt gggaactttt gaactgatga gctccaaaga tttagcatac cagatgacaa
2401 tttatgattg ggaactcttc aactgcgtgc atgagctgga gctaatctat cacacatttg
2461 gaaggcataa ttttaaaaag accacagcaa acttggattt gttcctgagg agatttaatg
2521 aaattcagtt ttgggtcgtc actgagatct gcctttgttc tcagctcagc aagcgtgttc
2581 agctattaaa aaaatttatt aagatagcag cccactgtaa ggagtataaa aatctgaatt
2641 ccttttttgc catcgtcatg ggactaagta acgttgctgt gagccgcttg gcactaacgt
2701 gggagaaact gccaagcaag ttcaagaagt tctatgcgga gtttgaaagt ttaatggacc
2761 cttcaaggaa ccacagggcc tacaggctga cagtagctaa gctggaacct cctctcatcc
2821 ccttcatgcc tttgctcatt aaagatatga catttactca tgaggggaac aagacgttca
2881 ttgacaatct agtaaacttt gaaaaaatgc gcatgattgc aaatacggcc agaacagtga
2941 gatactacag gagccaaccc ttcaatcctg atgcagctca agctaataag aaccatcagg
3001 atgtccggag ttatgtacgg caattaaatg tgattgacaa ccagagaact ttatcacaga
3061 tgtcacacag attagagcct cgtcgaccat ag
//