LOCUS AK313042 1356 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93516, highly similar to Homo sapiens
sparc/osteonectin, cwcv and kazal-like domains proteoglycan
(testican) 3 (SPOCK3), mRNA.
ACCESSION AK313042
VERSION AK313042.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1356)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1356
/clone="BRAWH2011003"
/clone_lib="BRAWH2"
/db_xref="H-InvDB:HIT000431908"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 46..1356
/note="highly similar to Homo sapiens sparc/osteonectin,
cwcv and kazal-like domains proteoglycan (testican) 3
(SPOCK3), mRNA"
/protein_id="BAG35874.1"
/translation="MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQW
LTTISQYDKEVGQWNKFRDEVEDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCI
AQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSF
QCKLEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFK
ALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSI
YLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLL
GQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDFAS
GDFHEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI"
BASE COUNT 402 a 267 c 360 g 327 t
ORIGIN
1 gcatttccag caggagctgc gagcacagtg ctggctcaca acaagatgct caaggtgtca
61 gccgtactgt gtgtgtgtgc agccgcttgg tgcagtcagt ctctcgcagc tgccgcggcg
121 gtggctgcag ccggggggcg gtcggacggc ggtaattttc tggatgataa acaatggctc
181 accacaatct ctcagtatga caaggaagtc ggacagtgga acaaattccg agacgaagta
241 gaggatgatt atttccgcac ttggagtcca ggaaaaccct tcgatcaggc tttagatcca
301 gctaaggatc catgcttaaa gatgaaatgt agtcgccata aagtatgcat tgctcaagat
361 tctcagactg cagtctgcat tagtcaccgg aggcttacac acaggatgaa agaagcagga
421 gtagaccata ggcagtggag gggtcccata ttatccacct gcaagcagtg cccagtggtc
481 tatcccagcc ctgtttgtgg ttcagatggt catacctact cttttcagtg caaactagaa
541 tatcaggcat gtgtcttagg aaaacagatc tcagtcaaat gtgaaggaca ttgcccatgt
601 ccttcagata agcccaccag tacaagcaga aatgttaaga gagcatgcag tgacctggag
661 ttcagggaag tggcaaacag attgcgggac tggttcaagg cccttcatga aagtggaagt
721 caaaacaaga agacaaaaac attgctgagg cctgagagaa gcagattcga taccagcatc
781 ttgccaattt gcaaggactc acttggctgg atgtttaaca gacttgatac aaactatgac
841 ctgctattgg accagtcaga gctcagaagc atttaccttg ataagaatga acagtgtacc
901 aaggcattct tcaattcttg tgacacatac aaggacagtt taatatctaa taatgagtgg
961 tgctactgct tccagagaca gcaagaccca ccttgccaga ctgagctcag caatattcag
1021 aagcggcaag gggtaaagaa gctcctagga cagtatatcc ccctgtgtga tgaagatggt
1081 tactacaagc caacacaatg tcatggcagt gttggacagt gctggtgtgt tgacagatat
1141 ggaaatgaag tcatgggatc cagaataaat ggtgttgcag attgtgctat agattttgag
1201 atctccggag attttgctag tggcgatttt catgaatgga ctgatgatga ggatgatgaa
1261 gacgatatta tgaatgatga agatgaaatt gaagatgatg atgaagatga aggggatgat
1321 gatgatggtg gtgatgacca tgatgtatac atttga
//