LOCUS AK312953 1228 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93409, highly similar to Homo sapiens
interferon regulatory factor 2 (IRF2), mRNA.
ACCESSION AK312953
VERSION AK312953.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1228)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1228
/clone="TRACH3036930"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000431819"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 179..1228
/note="highly similar to Homo sapiens interferon
regulatory factor 2 (IRF2), mRNA"
/protein_id="BAG35793.1"
/translation="MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARH
GWDVEKDAPLFRNWAIHTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKG
NNAFRVYRMLPLSERPSKKGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAV
LTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSE
LYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPG
MASFVTSNKPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDRETRASV
IKKTSDITQARVKSC"
BASE COUNT 360 a 311 c 303 g 254 t
ORIGIN
1 ctctccttgt tttgctttcg atctggactg ttctcaggca agccggggag taacttttag
61 ttttgctcct gcgattattc aactgacggg ctttcatttc catttcacac accctagcaa
121 cacttatacc ttgcggaatt gtattggtag cgtgaaaaaa gcacactgag agggcaccat
181 gccggtggaa aggatgcgca tgcgcccgtg gctggaggag cagataaact ccaacacgat
241 cccggggctc aagtggctta acaaggaaaa gaagattttt cagatcccct ggatgcatgc
301 ggctagacat gggtgggatg tggaaaaaga tgcaccactc tttagaaact gggcaatcca
361 tacaggaaag catcaaccag gagtagataa acctgatccc aaaacatgga aggcgaattt
421 cagatgcgcc atgaattcct tgcctgatat tgaagaagtc aaggataaaa gcataaagaa
481 aggaaataat gccttcaggg tctaccgaat gctgccccta tcagaacggc cttctaagaa
541 aggaaagaaa ccaaagacag aaaaagaaga caaagttaag cacatcaagc aagaaccagt
601 tgagtcatct ctggggctta gtaatggagt aagtgatctt tctcctgagt atgcggtcct
661 gacttcaact ataaaaaatg aagtggatag tacggtgaac atcatagttg taggacagtc
721 ccatctggac agcaacattg agaatcaaga gattgtcacc aatccgccag acatttgcca
781 agttgtagag gtgaccactg agagcgacga gcagccggtc agcatgagcg agctctaccc
841 tctgcagatc tcccccgtgt cttcctatgc agaaagcgaa acgactgata gtgtgcccag
901 cgatgaagag agtgccgagg ggcggccaca ctggcggaag aggaatattg aaggcaaaca
961 gtacctcagc aacatgggga ctcgaggctc ctacctgctg cccggcatgg cgtccttcgt
1021 cacttccaac aaaccggacc tccaggtcac catcaaagag gagagcaatc cggtgcctta
1081 caacagctcc tggccccctt ttcaagacct ccccctttct tcctccatga ccccagcatc
1141 cagcagcagt cggccagacc gggagacccg ggccagcgtc atcaagaaaa catcggatat
1201 cacccaggcc cgcgtcaaga gctgttaa
//