LOCUS AK312922 1784 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93371, highly similar to Homo sapiens
retinoid X receptor, gamma (RXRG), mRNA.
ACCESSION AK312922
VERSION AK312922.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1784)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1784
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7010373"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000431788"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 393..1784
/note="highly similar to Homo sapiens retinoid X
receptor, gamma (RXRG), mRNA"
/protein_id="BAG35767.1"
/translation="MYGNYSHFMKFPAGYGGSPGHTGSTSMSPSAALSTGKPMDSHPS
YTDTPVSAPRTLSAVGTPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNV
VNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCK
GFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCCYQKCLVMGMKREAVQEERQRSRE
RAESEAECATSGHEDMPVERILEAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQ
LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVH
RSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVET
LREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDT
FLMEMLETPLQIT"
BASE COUNT 438 a 497 c 480 g 369 t
ORIGIN
1 gacgcgccgg gagctggaag agtcgcacgc agcagcccaa ccctgagtta atcaaactag
61 caacaggatc tcaagcagca gcgacggcgg tggcaagagt agctggtgac tggcggcggc
121 ggcggcggcg gcagcattat gcgtgattac ttgacaggca ccagctgctg ccgccacagc
181 cgtctcaaac gcactatgtg gactctccga tctagaggca gattcctgac taatcccaga
241 gggctggccc agcctgtgct ccccgggctg ctaggaagcg atgaccactc ttgttagccc
301 aagttgaaga aagccgggct gtgcctggga gccgagagag gcggtaatat ttagaagctg
361 cacaggagag gaacatgaac tgacgagtaa acatgtatgg aaattattct cacttcatga
421 agtttcccgc aggctatgga ggctcccctg gccacactgg ctctacatcc atgagcccat
481 cagcagcctt gtccacaggg aagccaatgg acagccaccc cagctacaca gataccccag
541 tgagtgcccc acggactctg agtgcagtgg ggacccccct caatgccctg ggctctccat
601 atcgagtcat cacctctgcc atgggcccac cctcaggagc acttgcagcg cctccaggaa
661 tcaacttggt tgccccaccc agctctcagc taaatgtggt caacagtgtc agcagttcag
721 aggacatcaa gcccttacca gggcttcccg ggattggaaa catgaactac ccatccacca
781 gccccggatc tctggttaaa cacatctgtg ccatctgtgg agacagatcc tcaggaaagc
841 actacggggt atacagttgt gaaggctgca aagggttctt caagaggacg ataaggaagg
901 acctcatcta cacgtgtcgg gataataaag actgcctcat tgacaagcgt cagcgcaacc
961 gctgccagta ctgttgctat cagaagtgcc ttgtcatggg catgaagagg gaagctgtgc
1021 aagaagaaag acagaggagc cgagagcgag ctgagagtga ggcagaatgt gctaccagtg
1081 gtcatgaaga catgcctgtg gagaggattc tagaagctga acttgctgtt gaaccaaaga
1141 cagaatccta tggtgacatg aatatggaga actcgacaaa tgaccctgtt accaacatat
1201 gtcatgctgc tgacaagcag cttttcaccc tcgttgaatg ggccaagcgt attccccact
1261 tctctgacct caccttggag gaccaggtca ttttgcttcg ggcagggtgg aatgaattgc
1321 tgattgcctc tttctcccac cgctcagttt ccgtgcagga tggcatcctt ctggccacgg
1381 gtttacatgt ccaccggagc agtgcccaca gtgctggggt cggctccatc tttgacagag
1441 ttctaactga gctggtttcc aaaatgaaag acatgcagat ggacaagtcg gaactgggat
1501 gcctgcgagc cattgtactc tttaacccag atgccaaggg cctgtccaac ccctctgagg
1561 tggagactct gcgagagaag gtttatgcca cccttgaggc ctacaccaag cagaagtatc
1621 cggaacagcc aggcaggttt gccaagctgc tgctgcgcct cccagctctg cgttccattg
1681 gcttgaaatg cctggagcac ctcttcttct tcaagctcat cggggacacc cccattgaca
1741 ccttcctcat ggagatgttg gagaccccgc tgcagatcac ctga
//