LOCUS AK312873 2625 bp mRNA linear HTC 24-MAY-2008 DEFINITION Homo sapiens cDNA, FLJ93317, highly similar to Homo sapiens cadherin 17, LI cadherin (liver-intestine) (CDH17), mRNA. ACCESSION AK312873 VERSION AK312873.1 KEYWORDS HTC; HTC_FLI; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2625) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K., Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T., Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S., Goshima,N., Nomura,N. and Isogai,T. TITLE NEDO functional analysis of protein and research application project JOURNAL Unpublished (2008) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC and Biological Information Research Center (BIRC), AIST; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2625 /clone="TRACH3023381" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000431739" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 127..2625 /note="highly similar to Homo sapiens cadherin 17, LI cadherin (liver-intestine) (CDH17), mRNA" /protein_id="BAG35725.1" /translation="MILQAHLHSLCLLMLYLATGYGQEGKFSGPLKPMTFSIYEGQEP SQIIFQFKANPPAVTFELTGGTDNIFVIEREGLLYYNRALDRETRSTHNLQVAALDAN GIIVEGPVPITIEVKDINDNRPTFLQSKYEGSVRQNSRPGKPFLYVNATDLDDPATPN GQLYYQIVIQLPMINNVMYFQINNKTGAISLTREGSQELNPAKNPSYNLVISVKDMGG QSENSFSDTTSVDIIVTENIWKAPKPVEMVENSTDPHPIKITQVRWNDPGAQYSLVDK EKLPRFPFSIDQEGDIYVTQPLDREEKDAYVFYAVAKDEYGKPLSYPLEIHVKVKDIN DNPPTCPSPVTVFEVQENERLGNSIGTLTAHDRDEENTANSFLNYRIVEQTPKLPMDG LFLIQTYAGMLQLAKQSLKKQDTPQYNLTIEVSDKDFKTLCFVQINVIDINDQIPIFE KSDYGNLTLAEDTNIGSTILTIQATDADEPFTGSSKILYHIIKGDSEGRLGVDTDPHT NTGYVIIKKPLDFETAAVSNIVFKAENPEPLVFGVKYNASSFAKFTLIVTDVNEAPQF SQHVFQAKVSEDVAIGTKLGNVTAKDPEGLDISYSLRGDTRGWLKIDHVTGEIFSVAP LDREAGSPYRVQVVATEVGGSSLSSVSEFHLILMDVNDNPPRLAKDYTGLFFCHPLSA PGSLIFEATDDDQHLFRGPHFTFSLGSGSLQNDWEVSKINGTHARLSTRHTDFEEREY VVLIRINDGGRPPLEGIVSLPVTFCSCVEGSCFRPAGHQTGIPTVGMAVGILLTTLLV IGIILAVVFIRIKKDKGKDNVESAQASEVKPLRS" BASE COUNT 757 a 581 c 605 g 682 t ORIGIN 1 aatcacggtg gaagtatgat attttggctg tggatctgag ttgatcaatc tgcttagtgg 61 acttgagtcc ccccaccccc gcttgtctga ttggggctcc tgggaggaat ttgaataaag 121 aaaactatga tacttcaggc ccatcttcac tccctgtgtc ttcttatgct ttatttggca 181 actggatatg gccaagaggg gaagtttagt ggacccctga aacccatgac attttctatt 241 tatgaaggcc aagaaccgag tcaaattata ttccagttta aggccaatcc tcctgctgtg 301 acttttgaac taactggggg gacagacaac atatttgtga tagaacggga gggacttctg 361 tattacaaca gagccttgga cagggaaaca agatctactc acaatctcca ggttgcagcc 421 ctggacgcta atggaattat agtggagggt ccagtcccta tcaccataga agtgaaggac 481 atcaacgaca atcgacccac gtttctccag tcaaagtacg aaggctcagt aaggcagaac 541 tctcgcccag gaaagccctt cttgtatgtc aatgccacag acctggatga tccggccact 601 cccaatggcc agctttatta ccagattgtc atccagcttc ccatgatcaa caatgtcatg 661 tactttcaga tcaacaacaa aacgggagcc atctctctta cccgagaggg atctcaggaa 721 ttgaatcctg ctaagaatcc ttcctataat ctggtgatct cagtgaagga catgggaggc 781 cagagtgaga attccttcag tgataccaca tctgtggata tcatagtgac agagaatatt 841 tggaaagcac caaaacctgt ggagatggtg gaaaactcaa ctgatcctca ccccatcaaa 901 atcactcagg tgcggtggaa tgatcccggt gcacaatatt ccttagttga caaagagaag 961 ctgccaagat tcccattttc aattgaccag gaaggagata tttacgtgac tcagcccttg 1021 gaccgagaag aaaaggatgc atatgttttt tatgcagttg caaaggatga gtacggaaaa 1081 ccactttcat atccgctgga aattcatgta aaagttaaag atattaatga taatccacct 1141 acatgtccgt caccagtaac cgtatttgag gtccaggaga atgaacgact gggtaacagt 1201 atcgggaccc ttactgcaca tgacagggat gaagaaaata ctgccaacag ttttctaaac 1261 tacaggattg tggagcaaac tcccaaactt cccatggatg gactcttcct aatccaaacc 1321 tatgctggaa tgttacagtt agctaaacag tccttgaaga agcaagatac tcctcagtac 1381 aacttaacga tagaggtgtc tgacaaagat ttcaagaccc tttgttttgt gcaaatcaac 1441 gttattgata tcaatgatca gatccccatc tttgaaaaat cagattatgg aaacctgact 1501 cttgctgaag acacaaacat tgggtccacc atcttaacca tccaggccac tgatgctgat 1561 gagccattta ctgggagttc taaaattctg tatcatatca taaagggaga cagtgaggga 1621 cgcctggggg ttgacacaga tccccatacc aacaccggat atgtcataat taaaaagcct 1681 cttgattttg aaacagcagc tgtttccaac attgtgttca aagcagaaaa tcctgagcct 1741 ctagtgtttg gtgtgaagta caatgcaagt tcttttgcca agttcacgct tattgtgaca 1801 gatgtgaatg aagcacctca attttcccaa cacgtattcc aagcgaaagt cagtgaggat 1861 gtagctatag gcactaaatt gggcaatgtg actgccaagg atccagaagg tctggacata 1921 agttattcac tgaggggaga cacaagaggt tggcttaaaa ttgaccacgt gactggtgag 1981 atctttagtg tggctccatt ggacagagaa gccggaagtc catatcgggt acaagtggtg 2041 gccacagaag taggggggtc ttccttgagc tctgtgtcag agttccacct gatccttatg 2101 gatgtgaatg acaaccctcc caggctagcc aaggactaca cgggcttgtt cttctgccat 2161 cccctcagtg cacctggaag tctcattttt gaggctactg atgatgatca gcacttattt 2221 cggggtcccc attttacatt ttccctcggc agtggaagct tacaaaacga ctgggaagtt 2281 tccaaaatca atggtactca tgcccgactg tctaccaggc acacagactt tgaggagagg 2341 gagtatgtcg tcttgatccg catcaatgat gggggtcggc cacccttgga aggcattgtt 2401 tctttaccag ttacattctg cagttgtgtg gaaggaagtt gtttccggcc agcaggtcac 2461 cagactggga tacccactgt gggcatggca gttggtatac tgctgaccac ccttctggtg 2521 attggtataa ttttagcagt tgtgtttatc cgcataaaga aggataaagg caaagataat 2581 gttgaaagtg ctcaagcatc tgaagtcaaa cctctgagaa gctga //