LOCUS AK312850 743 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93293, Homo sapiens sorting nexin 10
(SNX10), mRNA.
ACCESSION AK312850
VERSION AK312850.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 743)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..743
/clone="TKIDN2006900"
/clone_lib="TKIDN2"
/db_xref="H-InvDB:HIT000431716"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="kidney, tumor tissue"
CDS 138..743
/note="Homo sapiens sorting nexin 10 (SNX10), mRNA"
/protein_id="BAG35703.1"
/translation="MFPEQQKEEFVSVWVRDPRIQKEDFWHSYIDYEICIHTNSMCFT
MKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNLFFNMNNRQHVDQRRQGLEDFL
RKVLQNALLLSDSSLHLFLQSHLNSEDIEACVSGQTKYSVEEAIHKFALMNRRFPEED
EEGKKENDIDYDSESSSSGLGHSSDDSSSHGCKVNTAPQES"
BASE COUNT 217 a 164 c 181 g 181 t
ORIGIN
1 aaaaactccg cggcccgcaa gcccggctcg gcccggccct gctctgttct gcccggagga
61 gccgcccgta agtgacaaga gacccgctga gggggcctcc cctgcaccgc ccagattgat
121 cgtgtcctgt gctgaagatg tttccggaac aacagaaaga ggaatttgta agtgtctggg
181 ttcgagatcc taggattcag aaggaggact tctggcattc ttacattgac tatgagatat
241 gtattcatac taatagcatg tgttttacaa tgaaaacatc ctgtgtacga agaagatata
301 gagaattcgt gtggctgagg cagagactcc aaagtaatgc gttgctggta caactgccag
361 aacttccatc taaaaacctg tttttcaaca tgaacaatcg ccagcacgtg gatcagcgtc
421 gccagggtct ggaagatttc ctcagaaaag tcctacagaa tgcacttttg ctttcagata
481 gcagccttca cctcttctta cagagccatc tgaattcaga agacattgag gcgtgtgttt
541 ctgggcagac taagtactct gtggaagaag caattcacaa gtttgcctta atgaatagac
601 gtttccctga agaagatgaa gaaggaaaaa aagaaaatga tatagattat gattcagaaa
661 gttcatcctc tgggcttgga cacagtagtg atgacagcag ttcacatgga tgtaaagtaa
721 atacagctcc gcaggaatcc tga
//