LOCUS       AK312807                2832 bp    mRNA    linear   HTC 24-MAY-2008
DEFINITION  Homo sapiens cDNA, FLJ93236, highly similar to Homo sapiens
            nuclear cap binding protein subunit 1, 80kDa (NCBP1),mRNA.
ACCESSION   AK312807
VERSION     AK312807.1
KEYWORDS    HTC; HTC_FLI; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2832)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
            Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
            Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
            Goshima,N., Nomura,N. and Isogai,T.
  TITLE     NEDO functional analysis of protein and research application
            project
  JOURNAL   Unpublished (2008)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC and Biological
            Information Research Center (BIRC), AIST; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
            
            The reason of remaining 5'-end "N": This sequence was generated
            from 5'-end region of cDNA insert including about 20 base of the
            sequence before "N". This cDNA was obtained from oligo-capped cDNA
            library by which method 5'-end of mRNA was efficiently cloned.
            Therefore remaining 5'-end "N" is important for a detection of
            transcription start site of this mRNA.
FEATURES             Location/Qualifiers
     source          1..2832
                     /clone="TESTI4024374"
                     /clone_lib="TESTI4"
                     /db_xref="H-InvDB:HIT000431673"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /organism="Homo sapiens"
                     /tissue_type="testis"
     CDS             460..2832
                     /note="highly similar to Homo sapiens nuclear cap binding
                     protein subunit 1, 80kDa (NCBP1),mRNA"
                     /protein_id="BAG35665.1"
                     /translation="MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSAC
                     SLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLSEKLTIYTTLVGLLNARNYNFGG
                     EFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEED
                     VPQVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWT
                     ADKPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPH
                     TEDSVYPMPRVIFRMFDYTDDPEGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAA
                     QLVSYPGKNKIPLNYHIVEVIFAELFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLA
                     QATEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFRWSWEDWSDCLSQDPESPKPKFVR
                     EVLEKCMRLSYHQRILDIVPPTFSALCPANPTCIYKYGDESSNSLPGHSVALCLAVAF
                     KSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVFVQTLLHLAAKSFSHSFSAL
                     AKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWIF
                     SSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRGDDDDRSSD
                     RKDGVLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETDGTSVLTPWY
                     KNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFCALQA"
BASE COUNT          781 a          651 c          693 g          706 t
ORIGIN      
        1 nttgagaggc caccgggaaa ccattgagaa gccccggagg accggcctga gcggaggcgg
       61 agactagagc ggccgccggc acgacccgcc ttcaggcgta cgacgaccgc ggcccggggg
      121 ctctgagtgg ccaaagcggc ggcactttct gcgtggcccc ggaaggacat agagcggaag
      181 gcgggagaaa gaagtagccg gcaggcggag gcagcccgag ggggcggttg catttgtgcc
      241 agacgttcgt agcccactga gcttcctcac gccggctgtc gcagcgccta gccccacccg
      301 gcggcctctc ctgcgcttcc ggggccgtgg cgagctagtg cgcctgcgtg ccggcccatc
      361 cgcgcgcctt gcagctgtcc ttgcgtcggc cagcggccag acagttcctg cagcgcttac
      421 cgcctggcct ctcggttccg cggcgcaccg gagggcagca tgtcgcggcg gcggcacagc
      481 gacgagaacg acggtgggca gcctcacaaa aggagaaaga cctctgatgc aaatgaaact
      541 gaagatcatt tggaatcttt aatatgtaaa gtaggagaaa agagtgcctg ctctttggag
      601 agcaacctag aaggcttggc tggtgttttg gaagctgatc ttcctaacta caagagcaag
      661 atcttaaggc ttctttgtac agttgcacgc ctattatctg agaagctgac aatttataca
      721 acattagttg gactactgaa tgccaggaat tacaattttg gtggagaatt tgtagaagcc
      781 atgattcgtc aacttaaaga atcattgaaa gcaaacaatt ataatgaagc cgtgtatttg
      841 gtccgttttt tatctgatct tgtgaattgt catgtgattg ccgccccatc aatggttgct
      901 atgtttgaaa attttgtaag cgtaactcag gaagaagatg tacctcaggt gcgacgagat
      961 tggtatgtgt atgcatttct gtcatctttg ccctgggttg gaaaggagtt gtacgaaaag
     1021 aaagatgcag agatggaccg catctttgcc aacactgaaa gctatcttaa aagacgccaa
     1081 aagactcatg tacccatgtt acaggtatgg actgctgata aaccacatcc acaagaagag
     1141 tatttagatt gcctgtgggc ccagattcag aaattgaaaa aggatcgctg gcaggaacgg
     1201 cacatcctaa gaccttatct tgcctttgac agcatcctgt gtgaagcact gcagcacaat
     1261 ctgcctcctt ttacaccacc tcctcacact gaagattcag tgtacccaat gccaagggtc
     1321 atcttcagaa tgtttgatta cacagatgat cccgagggtc ctgtcatgcc agggagtcat
     1381 tcagtggaaa gatttgtaat agaagagaat cttcactgca tcattaagtc ccactggaag
     1441 gaaaggaaga cttgtgctgc acagttagtg agctatccag ggaagaacaa gatccccttg
     1501 aactaccaca tagttgaggt gatctttgca gagctgtttc aacttccagc accccctcac
     1561 attgatgtga tgtacacaac actcctcatt gaactgtgca aacttcaacc tggctctcta
     1621 ccccaagttc ttgcacaggc aactgaaatg ctatacatgc gtttggacac aatgaacact
     1681 acctgtgtag acaggtttat taattggttt tctcatcatc taagtaactt ccagttccgt
     1741 tggagctggg aagattggtc agattgtctt agtcaagatc ctgaaagtcc caaaccgaag
     1801 tttgtaagag aagttctaga aaaatgtatg aggttgtctt accatcagcg tatattagat
     1861 attgttcctc ctaccttctc agctctgtgt cctgcaaacc caacctgcat ttacaagtat
     1921 ggagatgaaa gtagcaattc tcttcctgga cattctgttg ccctctgttt agctgttgcc
     1981 tttaaaagta aggcaaccaa tgatgaaatc ttcagcattc tgaaagatgt accaaatcct
     2041 aaccaggatg atgacgacga tgaaggattc agttttaacc cattgaaaat agaagtcttt
     2101 gtacagactc tgctacactt ggcagccaaa tcattcagcc actccttcag tgctcttgca
     2161 aagtttcatg aagtcttcaa aaccctagct gaaagtgatg aaggaaagtt acatgtgcta
     2221 agagttatgt ttgaggtctg gaggaaccat ccacagatga ttgctgtact agtggataag
     2281 atgattcgta cacaaatagt tgattgtgct gccgtagcaa attggatctt ctcttcagaa
     2341 ctatctcgtg actttaccag attgtttgtt tgggaaattt tgcactctac aattcgtaag
     2401 atgaacaaac atgtcctgaa gatccagaaa gagctggaag aagctaaaga gaaacttgct
     2461 aggcaacaca aacggcgagg tgatgatgac gacagaagca gtgacaggaa agacggggtt
     2521 cttgaggaac aaatagaacg acttcaggaa aaagtggaat ctgctcagag tgaacaaaag
     2581 aatcttttcc tcgttatatt tcagcggttt atcatgatct tgaccgagca cctagtacga
     2641 tgcgaaactg atgggaccag tgtattaaca ccatggtata agaactgtat agagaggctg
     2701 cagcagatct tcctacagca tcaccaaata atccagcagt acatggtgac cctggagaac
     2761 cttctcttca ctgctgaatt agaccctcat atcttggccg tgttccagca gttctgtgcc
     2821 ctgcaggcct aa
//