LOCUS AK312719 1965 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93123, highly similar to Homo sapiens solute
carrier family 6 (neurotransmitter transporter, GABA), member 11
(SLC6A11), mRNA.
ACCESSION AK312719
VERSION AK312719.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1965)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1965
/clone="OCBBF2030780"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000431585"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 67..1965
/note="highly similar to Homo sapiens solute carrier
family 6 (neurotransmitter transporter, GABA), member 11
(SLC6A11), mRNA"
/protein_id="BAG35593.1"
/translation="MTAEKALPLGNGKAAEEARESEAPGGGCSSGGAAPARHPRVKRD
KAVHERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIP
VFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSN
CFTTELPWATCGHEWNTENCVEFQKLNVSNYSHVSLQNATSPVMEFWEHRVLAISDGI
EHIGNLRWELALCLLAAWTICYFCIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLP
GASEGIKLYLYPDLSRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDC
IMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLS
PLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRRELLILALSVISYFL
GLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECICIGWVYGSNRFYDNIEDMIGYRP
PSLIKWCWMIMTPGICAGIFIFFLIKYKPLKYNNIYTYPAWGYGIGWLMALSSMLCIP
LWICITVWKTEGTLPEKLQKLTTPSTDLKMRGKLGVSPRMVTVNDCDAKLKSDGTIAA
ITEKETHF"
BASE COUNT 386 a 533 c 584 g 462 t
ORIGIN
1 gaaaagccag ctcgcccggg gcggcggcgc agagccgggc cggcgcacga ggcagccagc
61 gcggccatga cggcggagaa ggcgctgccc ctgggcaatg ggaaggctgc tgaggaggcg
121 cgggagtccg aggcgccggg tggcggctgc agcagcgggg gcgcggcgcc cgcgcgccac
181 ccgcgcgtca agcgcgacaa ggcggtccac gagcgcggcc actggaacaa caaggtggag
241 ttcgtgctga gcgtggccgg ggagatcatt gggctgggca acgtgtggcg cttcccctac
301 ctgtgctaca agaacggagg aggggcattc ctgattccct acgtggtgtt ttttatttgc
361 tgtggaattc ctgttttttt cctggagaca gctctggggc agttcacaag tgaaggtggc
421 attacgtgtt ggaggaaagt ttgcccttta tttgaaggca ttggctatgc aacacaggtg
481 attgaggccc atctgaatgt gtactacatc atcatcctgg catgggccat tttttacctg
541 agcaactgct tcactactga gctaccctgg gctacctgtg ggcatgagtg gaacacagag
601 aattgtgtgg agttccagaa actgaatgtg agcaactaca gccatgtgtc tctgcagaat
661 gccacctccc ctgtcatgga gttttgggag caccgggtcc tggccatctc tgacgggatc
721 gagcacatcg ggaaccttcg ctgggagctg gccttgtgtc tcttggcagc ctggaccatc
781 tgttacttct gtatctggaa ggggaccaag tctacaggaa aggttgtata cgtgactgcg
841 acattcccct acatcatgct gctgatcctc ctgatacgag gggtcacgtt gcccggggcc
901 tcagagggca tcaagctcta cttgtaccct gacctctccc ggctctccga cccccaggtc
961 tgggtagatg ctggaacgca gatctttttc tcctatgcca tttgcctggg ctgtctgacc
1021 gctctgggaa gttataacaa ttataacaac aactgctaca gggactgcat catgctctgt
1081 tgcctgaaca gcggcaccag cttcgtggct gggtttgcca tcttctcagt cctgggtttt
1141 atggcgtacg agcagggggt acccattgct gaggtggcag agtcaggccc cggcctggcc
1201 tttattgcat accccaaggc ggtcaccatg atgcctctct ccccgctgtg ggccaccttg
1261 ttcttcatga tgctcatctt cctgggcctg gacagccagt ttgtgtgtgt ggaaagcctg
1321 gtgaccgccg tggtggacat gtaccccaag gttttccgga ggggttaccg gcgggagctg
1381 ctcatcctag ccttgtctgt tatctcctat tttctgggcc tcgtgatgtt aacagagggt
1441 ggcatgtaca tcttccagct ctttgactcc tatgccgcca gtgggatgtg ccttctcttc
1501 gtggccatct ttgagtgcat ctgcatcggc tgggtgtatg gaagcaaccg gttctatgat
1561 aacattgaag acatgattgg ctaccggcca ccgtcgctca ttaagtggtg ctggatgatc
1621 atgacccctg ggatctgcgc ggggatcttc atcttcttct tgatcaagta caagccactc
1681 aagtacaaca acatctacac ctacccagcc tggggctatg gcattggctg gctcatggcc
1741 ctgtcctcca tgctctgcat cccgctctgg atctgcatca cagtgtggaa gacggagggg
1801 acactgcccg agaaactcca gaagttgacg acccccagca cagatctgaa aatgcggggc
1861 aagcttgggg tgagcccacg gatggtgaca gttaatgact gtgatgccaa actcaagagt
1921 gacgggacca tcgcagccat cacagagaag gagacgcact tctga
//