LOCUS AK312704 2432 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93103, Homo sapiens neurotrophic tyrosine
kinase, receptor, type 1(NTRK1), mRNA.
ACCESSION AK312704
VERSION AK312704.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2432)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2432
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7017201"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000431570"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 42..2432
/note="Homo sapiens neurotrophic tyrosine kinase,
receptor, type 1(NTRK1), mRNA"
/protein_id="BAG35582.1"
/translation="MLRGGRRGQLGWHSWAAGPGSLLAWLILASAGAAPCPDACCPHG
SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG
LRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQ
RWEEEGLGGVPEQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVE
GRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEV
SVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLE
PAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPEDPIP
VSFSPVDTNSTSGDPVEKKDETPFGVSVAVGLAVFACLFLSTLLLVLNKCGRRNKFGI
NRPAVLAPEDGLAMSLHFMTLGGSSLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRR
DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM
LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL
GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR
VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI
TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVLG"
BASE COUNT 426 a 762 c 772 g 472 t
ORIGIN
1 acagacggct gccccgcctg agcgaggcgg gcgccgccgc gatgctgcga ggcggacggc
61 gcgggcagct tggctggcac agctgggctg cggggccggg cagcctgctg gcttggctga
121 tactggcatc tgcgggcgcc gcaccctgcc ccgatgcctg ctgcccccac ggctcctcgg
181 gactgcgatg cacccgggat ggggccctgg atagcctcca ccacctgccc ggcgcagaga
241 acctgactga gctctacatc gagaaccagc agcatctgca gcatctggag ctccgtgatc
301 tgaggggcct gggggagctg agaaacctca ccatcgtgaa gagtggtctc cgtttcgtgg
361 cgccagatgc cttccatttc actcctcggc tcagtcgcct gaatctctcc ttcaacgctc
421 tggagtctct ctcctggaaa actgtgcagg gcctctcctt acaggaactg gtcctgtcgg
481 ggaaccctct gcactgttct tgtgccctgc gctggctaca gcgctgggag gaggagggac
541 tgggcggagt gcctgaacag aagctgcagt gtcatgggca agggcccctg gcccacatgc
601 ccaatgccag ctgtggtgtg cccacgctga aggtccaggt gcccaatgcc tcggtggatg
661 tgggggacga cgtgctgctg cggtgccagg tggaggggcg gggcctggag caggccggct
721 ggatcctcac agagctggag cagtcagcca cggtgatgaa atctgggggt ctgccatccc
781 tggggctgac cctggccaat gtcaccagtg acctcaacag gaagaacgtg acgtgctggg
841 cagagaacga tgtgggccgg gcagaggtct ctgttcaggt caacgtctcc ttcccggcca
901 gtgtgcagct gcacacggcg gtggagatgc accactggtg catccccttc tctgtggatg
961 ggcagccggc accgtctctg cgctggctct tcaatggctc cgtgctcaat gagaccagct
1021 tcatcttcac tgagttcctg gagccggcag ccaatgagac cgtgcggcac gggtgtctgc
1081 gcctcaacca gcccacccac gtcaacaacg gcaactacac gctgctggct gccaacccct
1141 tcggccaggc ctccgcctcc atcatggctg ccttcatgga caaccctttc gagttcaacc
1201 ccgaggaccc catccctgtc tccttctcgc cggtggacac taacagcaca tctggagacc
1261 cggtggagaa gaaggacgaa acaccttttg gggtctcggt ggctgtgggc ctggccgtct
1321 ttgcctgcct cttcctttct acgctgctcc ttgtgctcaa caaatgtgga cggagaaaca
1381 agtttgggat caaccgcccg gctgtgctgg ctccagagga tgggctggcc atgtccctgc
1441 atttcatgac attgggtggc agctccctgt cccccaccga gggcaaaggc tctgggctcc
1501 aaggccacat catcgagaac ccacaatact tcagtgatgc ctgtgttcac cacatcaagc
1561 gccgggacat cgtgctcaag tgggagctgg gggagggcgc ctttgggaag gtcttccttg
1621 ctgagtgcca caacctcctg cctgagcagg acaagatgct ggtggctgtc aaggcactga
1681 aggaggcgtc cgagagtgct cggcaggact tccaacgtga ggctgagctg ctcaccatgc
1741 tgcagcacca gcacatcgtg cgcttcttcg gcgtctgcac cgagggccgc cccctgctca
1801 tggtctttga gtatatgcgg cacggggacc tcaaccgctt cctccgatcc catggacctg
1861 atgccaagct gctggctggt ggggaggatg tggctccagg ccccctgggt ctggggcagc
1921 tgctggccgt ggctagccag gtcgctgcgg ggatggtgta cctggcgggt ctgcattttg
1981 tgcaccggga cctggccaca cgcaactgtc tagtgggcca gggactggtg gtcaagattg
2041 gtgattttgg catgagcagg gatatctaca gcaccgacta ttaccgtgtg ggaggccgca
2101 ccatgctgcc cattcgctgg atgccgcccg agagcatcct gtaccgtaag ttcaccaccg
2161 agagcgacgt gtggagcttc ggcgtggtgc tctgggagat cttcacctac ggcaagcagc
2221 cctggtacca gctctccaac acggaggcaa tcgactgcat cacgcaggga cgtgagttgg
2281 agcggccacg tgcctgccca ccagaggtct acgccatcat gcggggctgc tggcagcggg
2341 agccccagca acgccacagc atcaaggatg tgcacgcccg gctgcaagcc ctggcccagg
2401 cacctcctgt ctacctggat gtcctgggct ag
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