LOCUS AK312682 1109 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93075, Homo sapiens lumican (LUM), mRNA.
ACCESSION AK312682
VERSION AK312682.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1109)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1109
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2008437"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000431548"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 93..1109
/note="Homo sapiens lumican (LUM), mRNA"
/protein_id="BAG35562.1"
/translation="MSLSAFTLFLALIGGTSGQYYDYDFPLSIYGQSSPNCAPECNCP
ESYPSAMYCDELKLKSVPMVPPGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLL
ENSKIKGRVFSKLKQLKKLHINHNNLTESVGPLPKSLEDLQLTHNKITKLGSFEGLVN
LTFIHLQHNRLKEDAVSAAFKGLKSLEYLDLSFNQIARLPSGLPVSLLTLYLDNNKIS
NIPDEYFKRFNALQYLRLSHNELADSGIPGNSFNVSSLVELDLSYNKLKNIPTVNENL
ENYYLEVNQLEKFDIKSFCKILGPLSYSKIKHLRLDGNRISETSLPPDMYECLRVANE
VTLN"
BASE COUNT 336 a 246 c 211 g 316 t
ORIGIN
1 atatattggt ggattcttgt ccatagtgca tctgctttaa gaattaacga aagcagtgtc
61 aagacagtaa ggattcaaac catttgccaa aaatgagtct aagtgcattt actctcttcc
121 tggcattgat tggtggtacc agtggccagt actatgatta tgattttccc ctatcaattt
181 atgggcaatc atcaccaaac tgtgcaccag aatgtaactg ccctgaaagc tacccaagtg
241 ccatgtactg tgatgagctg aaattgaaaa gtgtaccaat ggtgcctcct ggaatcaagt
301 atctttacct taggaataac cagattgacc atattgatga aaaggccttt gagaatgtaa
361 ctgatctgca gtggctcatt ctagatcaca accttctaga aaactccaag ataaaaggga
421 gagttttctc taaattgaaa caactgaaga agctgcatat aaaccacaac aacctgacag
481 agtctgtggg cccacttccc aaatctctgg aggatctgca gcttactcat aacaagatca
541 caaagctggg ctcttttgaa ggattggtaa acctgacctt catccatctc cagcacaatc
601 ggctgaaaga ggatgctgtt tcagctgctt ttaaaggtct taaatcactc gaataccttg
661 acttgagctt caatcagata gccagactgc cttctggtct ccctgtctct cttctaactc
721 tctacttaga caacaataag atcagcaaca tccctgatga gtatttcaag cgttttaatg
781 cattgcagta tctgcgttta tctcacaacg aactggctga tagtggaata cctggaaatt
841 ctttcaatgt gtcatccctg gttgagctgg atctgtccta taacaagctt aaaaacatac
901 caactgtcaa tgaaaacctt gaaaactatt acctggaggt caatcaactt gagaagtttg
961 acataaagag cttctgcaag atcctggggc cattatccta ctccaagatc aagcatttgc
1021 gtttggatgg caatcgcatc tcagaaacca gtcttccacc ggatatgtat gaatgtctac
1081 gtgttgctaa cgaagtcact cttaattaa
//