LOCUS AK312636 1639 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93020, highly similar to Homo sapiens
intercellular adhesion molecule 1 (CD54), human rhinovirus
receptor (ICAM1), mRNA.
ACCESSION AK312636
VERSION AK312636.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1639)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1639
/clone="HLUNG2010499"
/clone_lib="HLUNG2"
/db_xref="H-InvDB:HIT000431502"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="lung"
CDS 41..1639
/note="highly similar to Homo sapiens intercellular
adhesion molecule 1 (CD54), human rhinovirus receptor
(ICAM1), mRNA"
/protein_id="BAG35520.1"
/translation="MAPSSPRPALPALLVLLGALFPGPGNAQTSVSPSKVILPRGGSV
LVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQST
AKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKRE
PAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATP
PQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASV
SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEA
HPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRV
LYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD
LEGTYLCRARSTQGEVTRKVTVNVLSPRYEIVIITVVAAAVIMGTAGLSTYLYNRQRK
IKKYRLQQAQKGTPMKPNTQATPP"
BASE COUNT 362 a 520 c 475 g 282 t
ORIGIN
1 gagctcctct gctactcaga gttgcaacct cagcctcgct atggctccca gcagcccccg
61 gcccgcgctg cccgcactcc tggtcctgct cggggctctg ttcccaggac ctggcaatgc
121 ccagacatct gtgtccccct caaaagtcat cctgccccgg ggaggctccg tgctggtgac
181 atgcagcacc tcctgtgacc agcccaagtt gttgggcata gagaccccgt tgcctaaaaa
241 ggagttgctc ctgcctggga acaaccggaa ggtgtatgaa ctgagcaatg tgcaagaaga
301 tagccaacca atgtgctatt caaactgccc tgatgggcag tcaacagcta aaaccttcct
361 caccgtgtac tggactccag aacgggtgga actggcaccc ctcccctctt ggcagccagt
421 gggcaagaac cttaccctac gctgccaggt ggagggtggg gcaccccggg ccaacctcac
481 cgtggtgctg ctccgtgggg agaaggagct gaaacgggag ccagctgtgg gggagcccgc
541 tgaggtcacg accacggtgc tggtgaggag agatcaccat ggagccaatt tctcgtgccg
601 cactgaactg gacctgcggc cccaagggct ggagctgttt gagaacacct cggcccccta
661 ccagctccag acctttgtcc tgccagcgac tcccccacaa cttgtcagcc cccgggtcct
721 agaggtggac acgcagggga ccgtggtctg ttccctggac gggctgttcc cagtctcgga
781 ggcccaggtc cacctggcac tgggggacca gaggttgaac cccacagtca cctatggcaa
841 cgactccttc tcggccaagg cctcagtcag tgtgaccgca gaggacgagg gcacccagcg
901 gctgacgtgt gcagtaatac tggggaacca gagccaggag acactgcaga cagtgaccat
961 ctacagcttt ccggcgccca acgtgattct gacgaagcca gaggtctcag aagggaccga
1021 ggtgacagtg aagtgtgagg cccaccctag agccaaggtg acgctgaatg gggttccagc
1081 ccagccactg ggcccgaggg cccagctcct gctgaaggcc accccagagg acaacgggcg
1141 cagcttctcc tgctctgcga ccctggaggt ggccggccag cttatacaca agaaccagac
1201 ccgggagctt cgtgtcctgt atggcccccg actggacgag agggattgtc cgggaaactg
1261 gacgtggcca gaaaattccc agcagactcc aatgtgccag gcttggggga acccattgcc
1321 cgagctcaag tgtctaaagg atggcacttt cccactgccc atcggggaat cagtgactgt
1381 cactcgagat cttgagggca cctacctctg tcgggccagg agcactcaag gggaggtcac
1441 ccgcaaggtg accgtgaatg tgctctcccc ccggtatgag attgtcatca tcactgtggt
1501 agcagccgca gtcataatgg gcactgcagg cctcagcacg tacctctata accgccagcg
1561 gaagatcaag aaatacagac tacaacaggc ccaaaaaggg acccccatga aaccgaacac
1621 acaagccacg cctccctga
//