LOCUS AK312567 2141 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92942, highly similar to Homo sapiens T-box,
brain, 1 (TBR1), mRNA.
ACCESSION AK312567
VERSION AK312567.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2141)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2141
/clone="FCBBF3001474"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000431433"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 93..2141
/note="highly similar to Homo sapiens T-box, brain, 1
(TBR1), mRNA"
/protein_id="BAG35462.1"
/translation="MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTD
NLERSSPLKKITRGMTNQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSAA
DRYLLSQSSQPQSAATAPSAMFPYPGQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSL
LSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFH
RHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGK
ADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQ
PRLHVVEVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFR
DNYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAG
AGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQRWFVTPANNRLDFAASAYDTATDFAG
NAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGTKSGSVLPCWP
NSAAAAARMAGANPYLGEEAEGLAAERSPLPPGAAEDAKPKDLSDSSWIETPPSIKSI
DSSDSGIYEQAKRRRISPADTPVSESSSPLKSEVLAQRDCEKNCAKDISGYYGFYSHS
"
BASE COUNT 449 a 708 c 586 g 398 t
ORIGIN
1 tgtctagtga gggggtctgt ggatttctag tttatgataa ataggacttt aaaaaccagg
61 gacgggaggg cgagtgttca ggttctagag ctatgcagct ggagcactgc ctttctcctt
121 ctatcatgct ctccaagaaa tttctcaatg tgagcagcag ctacccacat tcaggcggat
181 ccgagcttgt cttgcacgat catcccatta tctcgaccac tgacaacctg gagagaagtt
241 cacctttgaa aaaaattacc agggggatga cgaatcagtc agatacagac aattttcctg
301 actccaagga ctcaccaggg gacgtccaga gaagtaaact ctctcctgtc ttggacgggg
361 tctctgagct tcgtcacagt ttcgatggct ctgctgcaga tcgctacctc ctctctcagt
421 ccagccagcc acagtctgcg gccactgctc ccagtgccat gttcccgtac cccggccagc
481 acggaccggc gcaccccgcc ttctccatcg gcagccctag ccgctacatg gcccaccacc
541 cggtcatcac caacggagcc tacaacagcc tcctgtccaa ctcctcgccg cagggatacc
601 ccacggccgg ctacccctac ccacagcagt acggccactc ctaccaagga gctccgttct
661 accagttctc ctccacccag ccggggctgg tgcccggcaa agcacaggtg tacctgtgca
721 acaggcccct ttggctgaaa tttcaccggc accaaacgga gatgatcatc accaaacagg
781 gaaggcgcat gtttcctttt ttaagtttta acatttctgg tctcgatccc acggctcatt
841 acaatatttt tgtggatgtg attttggcgg atcccaatca ctggaggttt caaggaggca
901 aatgggttcc ttgcggcaaa gcagacacca atgtgcaagg aaatcgggtc tatatgcatc
961 cggattcccc caacactggg gctcactgga tgcgccaaga aatctctttt ggaaaactaa
1021 aacttacgaa caacaaagga gcttcaaata acaatgggca gatggtggtt ttacagtcct
1081 tgcacaagta ccagccccgc ctgcatgtgg tggaagtgaa cgaggacggc acggaggaca
1141 ctagccagcc cggccgcgtg cagacgttca ctttccctga gactcagttc atcgccgtca
1201 ccgcctacca gaacacggat attacacaac tgaaaataga tcacaaccct tttgcaaaag
1261 gatttcggga taattatgac acgatctaca ccggctgtga catggaccgc ctgaccccct
1321 cgcccaacga ctcgccgcgc tcgcagatcg tgcccggggc ccgctacgcc atggccggct
1381 ctttcctgca ggaccagttc gtgagcaact acgccaaggc ccgcttccac ccgggcgcgg
1441 gcgcgggccc cgggccgggt acggaccgca gcgtgccgca caccaacggg ctgctgtcgc
1501 cgcagcaggc cgaggacccg ggcgcgccct cgccgcaacg ctggtttgtg acgccggcca
1561 acaaccggct ggacttcgcg gcctcggcct atgacacggc cacggacttc gcgggcaacg
1621 cggccacgct gctctcttac gcggcggcgg gcgtgaaggc gctgccgctg caggctgcag
1681 gctgcactgg ccgcccgctc ggctactacg ccgacccgtc gggctggggc gcccgcagtc
1741 ccccgcagta ctgcggcacc aagtcgggct cggtgctgcc ctgctggccc aacagcgccg
1801 cggccgccgc gcgcatggcc ggcgccaatc cctacctggg cgaggaggcc gagggcctgg
1861 ccgccgagcg ctcgccgctg ccgcccggcg ccgccgagga cgccaagccc aaggacctgt
1921 ccgattccag ctggatcgag acgcccccct cgatcaagtc catcgactcc agcgactcgg
1981 ggatttacga gcaggccaag cggaggcgga tctcgccggc cgacacgccc gtgtccgaga
2041 gttcgtcccc gctcaagagc gaggtgctgg cccagcggga ctgcgagaag aactgcgcca
2101 aggacattag cggctactat ggcttctact cgcacagcta g
//