LOCUS AK312551 2775 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92924, Homo sapiens cadherin 1, type 1,
E-cadherin (epithelial) (CDH1),mRNA.
ACCESSION AK312551
VERSION AK312551.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2775)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2775
/clone="CTONG3005043"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000431417"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 127..2775
/note="Homo sapiens cadherin 1, type 1, E-cadherin
(epithelial) (CDH1),mRNA"
/protein_id="BAG35448.1"
/translation="MGPWSRSLSALLLLLQVSSWLCQEPEPCHPGFDAESYTFTVPRR
HLERGRVLGRVNFEDCTGRQRTAYFSLDTRFKVGTDGVITVKRPLRFHNPQIHFLVYA
WDSTYRKFSTKVTLNTVGHHHRPPPHQASVSGIQAELLTFPNSSPGLRRQKRDWVIPP
ISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTE
PLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVMEGAL
PGTSVMEVTATDADDDVNTYNAAIAYTILSQDPELPDKNMFTINRNTGVISVVTTGLD
RESFPTYTLVVQAADLQGEGLSTTATAVITVTDTNDNPPIFNPTTYKGQVPENEANVV
ITTLKVTDADAPNTPAWEAVYTILNDDGGQFVVTTNPVNNDGILKTAKGLDFEAKQQY
ILHVAVTNVVPFEVSLTTSTATVTVDVLDVNEAPIFVPPEKRVEVSEDFGVGQEITSY
TAQEPDTFMEQKITYRIWRDTANWLEINPDTGAISTRAELDREDFEHVKNSTYTALII
ATDNGSPVATGTGTLLLILSDVNDNAPIPEPRTIFFCERNPKPQVINIIDADLPPNTS
PFTAELTHGASANWTIQYNDPTQESIILKPKMALEVGDYKINLKLMDNQNKDQVTTLE
VSVCDCEGAAGVCRKAQPVEAGLQIPAILGILGGILALLILILLLLLFLRRRAVVKEP
LLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDARPEVTRNDVAPTLMSVPRYL
PRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKD
QDYDYLNEWGNRFKKLADMYGGGEDD"
BASE COUNT 727 a 765 c 688 g 595 t
ORIGIN
1 tcagtggcgt cggaactgca aagcacctgt gagcttgcgg aagtcagttc agactccagc
61 ccgctccagc ccggcccgac ccgaccgcac ccggcgcctg ccctcgctcg gcgtccccgg
121 ccagccatgg gcccttggag ccgcagcctc tcggcgctgc tgctgctgct gcaggtctcc
181 tcttggctct gccaggagcc ggagccctgc caccctggct ttgacgccga gagctacacg
241 ttcacggtgc cccggcgcca cctggagaga ggccgcgtcc tgggcagagt gaattttgaa
301 gattgcaccg gtcgacaaag gacagcctat ttttccctcg acacccgatt caaagtgggc
361 acagatggtg tgattacagt caaaaggcct ctacggtttc ataacccaca gatccatttc
421 ttggtctacg cctgggactc cacctacaga aagttttcca ccaaagtcac gctgaataca
481 gtggggcacc accaccgccc cccgccccat caggcctccg tttctggaat ccaagcagaa
541 ttgctcacat ttcccaactc ctctcctggc ctcagaagac agaagagaga ctgggttatt
601 cctcccatca gctgcccaga aaatgaaaaa ggcccatttc ctaaaaacct ggttcagatc
661 aaatccaaca aagacaaaga aggcaaggtt ttctacagca tcactggcca aggagctgac
721 acaccccctg ttggtgtctt tattattgaa agagaaacag gatggctgaa ggtgacagag
781 cctctggata gagaacgcat tgccacatac actctcttct ctcacgctgt gtcatccaac
841 gggaatgcag ttgaggatcc aatggagatt ttgatcacgg taaccgatca gaatgacaac
901 aagcccgaat tcacccagga ggtctttaag gggtctgtca tggaaggtgc tcttccagga
961 acctctgtga tggaggtcac agccacagac gcggacgatg atgtgaacac ctacaatgcc
1021 gccatcgctt acaccatcct cagccaagat cctgagctcc ctgacaaaaa tatgttcacc
1081 attaacagga acacaggagt catcagtgtg gtcaccactg ggctggaccg agagagtttc
1141 cctacgtata ccctggtggt tcaagctgct gaccttcaag gtgaggggtt aagcacaaca
1201 gcaacagctg tgatcacagt cactgacacc aacgataatc ctccgatctt caatcccacc
1261 acgtacaagg gtcaggtgcc tgagaacgag gctaacgtcg taatcaccac actgaaagtg
1321 actgatgctg atgcccccaa taccccagcg tgggaggctg tatacaccat attgaatgat
1381 gatggtggac aatttgtcgt caccacaaat ccagtgaaca acgatggcat tttgaaaaca
1441 gcaaagggct tggattttga ggccaagcag cagtacattc tacacgtagc agtgacgaat
1501 gtggtacctt ttgaggtctc tctcaccacc tccacagcca ccgtcaccgt ggatgtgctg
1561 gatgtgaatg aagcccccat ctttgtgcct cctgaaaaga gagtggaagt gtccgaggac
1621 tttggcgtgg gccaggaaat cacatcctac actgcccagg agccagacac atttatggaa
1681 cagaaaataa catatcggat ttggagagac actgccaact ggctggagat taatccggac
1741 actggtgcca tttccactcg ggctgagctg gacagggagg attttgagca cgtgaagaac
1801 agcacgtaca cagccctaat catagctaca gacaatggtt ctccagttgc tactggaaca
1861 gggacacttc tgctgatcct gtctgatgtg aatgacaacg cccccatacc agaacctcga
1921 actatattct tttgtgagag gaatccaaag cctcaggtca taaacatcat tgatgcagac
1981 cttcctccca atacatctcc cttcacagca gaactaacac acggggcgag tgccaactgg
2041 accattcagt acaacgaccc aacccaagaa tctatcattt tgaagccaaa gatggcctta
2101 gaggtgggtg actacaaaat caatctcaag ctcatggata accagaataa agaccaagtg
2161 accaccttag aggtcagcgt gtgtgactgt gaaggggccg ctggcgtctg taggaaggca
2221 cagcctgtcg aagcaggatt gcaaattcct gccattctgg ggattcttgg aggaattctt
2281 gctttgctaa ttctgattct gctgctcttg ctgtttcttc ggaggagagc ggtggtcaaa
2341 gagcccttac tgcccccaga ggatgacacc cgggacaacg tttattacta tgatgaagaa
2401 ggaggcggag aagaggacca ggactttgac ttgagccagc tgcacagggg cctggacgct
2461 cggcctgaag tgactcgtaa cgacgttgca ccaaccctca tgagtgtccc ccggtatctt
2521 ccccgccctg ccaatcccga tgaaattgga aattttattg atgaaaatct gaaagcggct
2581 gatactgacc ccacagcccc gccttatgat tctctgctcg tgtttgacta tgaaggaagc
2641 ggttccgaag ctgctagtct gagctccctg aactcctcag agtcagacaa agaccaggac
2701 tatgactact tgaacgaatg gggcaatcgc ttcaagaagc tggctgacat gtacggaggc
2761 ggcgaggacg actag
//