LOCUS AK312478 2529 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92836, Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain, secreted,
(semaphorin) 3C (SEMA3C), mRNA.
ACCESSION AK312478
VERSION AK312478.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2529)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2529
/clone="BRHIP3025228"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000431344"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 274..2529
/note="Homo sapiens sema domain, immunoglobulin domain
(Ig), short basic domain, secreted, (semaphorin) 3C
(SEMA3C), mRNA"
/protein_id="BAG35382.1"
/translation="MAFRTICVLVGVFICSICVKGSSQPQARVYLTFDELRETKTSEY
FSLSHHPLDYRILLMDEDQDRIYVGSKDHILSLNINNISQEALSVFWPASTIKVEECK
MAGKDPTHGCGNFVRVIQTFNRTHLYVCGSGAFSPVCTYLNRGRRSEDQVFMIDSKCE
SGKGRCSFNPNVNTVSVMINEELFSGMYIDFMGTDAAIFRSLTKRNAVRTDQHNSKWL
SEPMFVDAHVIPDGTDPNDAKVYFFFKEKLTDNNRSTKQIHSMIARICPNDTGGLRSL
VNKWTTFLKARLVCSVTDEDGPETHFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKG
SAVCVYHLSDIQTVFNGPFAHKEGPNHQLISYQGRIPYPRPGTCPGGAFTPNMRTTKE
FPDDVVTFIRNHPLMYNSIYPIHKRPLIVRIGTDYKYTKIAVDRVNAADGRYHVLFLG
TDRGTVQKVVVLPTNNSVSGELILEELEVFKNHAPITTMKISSKKQQLYVSSNEGVSQ
VSLHRCHIYGTACADCCLARDPYCAWDGHSCSRFYPTGKRRSRRQDVRHGNPLTQCRG
FNLKAYRNAAEIVQYGVKNNTTFLECAPKSPQASIKWLLQKDKDRRKEVKLNERIIAT
SQGLLIRSVQGSDQGLYHCIATENSFKQTIAKINFKVLDSEMVAVVTDKWSPWTWASS
VRALPFHPKDIMGAFSHSEMQMINQYCKDTRQQHQQGDESQKMRGDYGKLKALINSRK
SRNRRNQLPES"
BASE COUNT 741 a 549 c 588 g 651 t
ORIGIN
1 actttccatt cactccgagg tgcttgattg agcgacgcgg agaagagctc cgggtgccgc
61 ggcactgcag cgctgagatt cctttacaaa gaaactcaga ggaccgggaa gaaagaattt
121 cacctttgcg acgtgctaga aaataaggtc gtctgggaaa aggactggag acacaagcgc
181 atccaacccc ggtagcaaac tgatgacttt tccgtgctga tttctttcaa cctcggtatt
241 ttcccttgga tattaacttg catatctgaa gaaatggcat tccggacaat ttgcgtgttg
301 gttggagtat ttatttgttc tatctgtgtg aaaggatctt cccagcccca agcaagagtt
361 tatttaacat ttgatgaact tcgagaaacc aagacctctg aatacttcag cctttcccac
421 catcctttag actacaggat tttattaatg gatgaagatc aggaccggat atatgtggga
481 agcaaagatc acattctttc cctgaatatt aacaatataa gtcaagaagc tttgagtgtt
541 ttctggccag catctacaat caaagttgaa gaatgcaaaa tggctggcaa agatcccaca
601 cacggctgtg ggaactttgt ccgtgtaatt cagactttca atcgcacaca tttgtatgtc
661 tgtgggagtg gcgctttcag tcctgtctgt acttacttga acagagggag gagatcagag
721 gaccaagttt tcatgattga ctccaagtgt gaatctggaa aaggacgctg ctctttcaac
781 cccaacgtga acacggtgtc tgttatgatc aatgaggagc ttttctctgg aatgtatata
841 gatttcatgg ggacagatgc tgctattttt cgaagtttaa ccaagaggaa tgcggtcaga
901 actgatcaac ataattccaa atggctaagt gaacctatgt ttgtagatgc acatgtcatc
961 ccagatggta ctgatccaaa tgatgctaag gtgtacttct tcttcaaaga aaaactgact
1021 gacaataaca ggagcacgaa acagattcat tccatgattg ctcgaatatg tcctaatgac
1081 actggtggac tgcgtagcct tgtcaacaag tggaccactt tcttaaaggc gaggctggtg
1141 tgctcggtaa cagatgaaga cggcccagaa acacactttg atgaattaga ggatgtgttt
1201 ctgctggaaa ctgataaccc gaggacaaca ctagtgtatg gcatttttac aacatcaagc
1261 tcagttttca aaggatcagc cgtgtgtgtg tatcatttat ctgatataca gactgtgttt
1321 aatgggcctt ttgcccacaa agaagggccc aatcatcagc tgatttccta tcagggcaga
1381 attccatatc ctcgccctgg aacttgtcca ggaggagcat ttacacccaa tatgcgaacc
1441 accaaggagt tcccagatga tgttgtcact tttattcgga accatcctct catgtacaat
1501 tccatctacc caatccacaa aaggcctttg attgttcgta ttggcactga ctacaagtac
1561 acaaagatag ctgtggatcg agtgaacgct gctgatggga gataccatgt cctgtttctc
1621 ggaacagatc ggggtactgt gcaaaaagtg gttgttcttc ctactaacaa ctctgtcagt
1681 ggcgagctca ttctggagga gctggaagtc tttaagaatc atgctcctat aacaacaatg
1741 aaaatttcat ctaaaaagca acagttgtat gtgagttcca atgaaggggt ttcccaggta
1801 tctctgcacc gctgccacat ctatggtaca gcctgtgctg actgctgcct ggcgcgggac
1861 ccttattgcg cctgggatgg ccattcctgt tccagattct acccaactgg gaaacggagg
1921 agccgaagac aagatgtgag acatggaaac ccactgactc aatgcagagg atttaatcta
1981 aaagcataca gaaatgcagc tgaaattgtg cagtatggag taaaaaataa caccactttt
2041 ctggagtgtg cccccaagtc tccgcaggca tctatcaagt ggctgttaca gaaagacaaa
2101 gacaggagga aagaggttaa gctgaatgaa cgaataatag ccacttcaca gggactcctg
2161 atccgctctg ttcagggttc tgaccaagga ctttatcact gcattgctac agaaaatagt
2221 ttcaagcaga ccatagccaa gatcaacttc aaagttttag attcagaaat ggtggctgtt
2281 gtgacggaca aatggtcccc gtggacctgg gccagctctg tgagggcttt acccttccac
2341 ccgaaggaca tcatgggggc attcagccac tcagaaatgc agatgattaa ccaatactgc
2401 aaagacactc ggcagcaaca tcagcaggga gatgaatcac agaaaatgag aggggactat
2461 ggcaagttaa aggccctcat caatagtcgg aaaagtagaa acaggaggaa tcagttgcca
2521 gagtcataa
//