LOCUS AK312452 1944 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92807, highly similar to Homo sapiens
secretogranin II (chromogranin C) (SCG2), mRNA.
ACCESSION AK312452
VERSION AK312452.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1944)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1944
/clone="BRCAN2027151"
/clone_lib="BRCAN2"
/db_xref="H-InvDB:HIT000431318"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="caudate nucleus"
CDS 91..1944
/note="highly similar to Homo sapiens secretogranin II
(chromogranin C) (SCG2), mRNA"
/protein_id="BAG35359.1"
/translation="MAEAKTHWLGAALSLIPLIFLISGAEAASFQRNQLLQKEPDLRL
ENVQKFPSPEMIRALEYIENLRQQAHKEESSPDYNPYQGVSVPLQQKENGDESHLPER
DSLSEEDWMRIILEALRQAENEPQSAPKENKPYALNSEKNFPMDMSDDYETQQWPERK
LKHMQFPPMYEENSRDNPFKRTNEIVEEQYTPQSLATLESVFQELGKLTGPNNQKRER
MDEEQKLYTDDEDDIYKANNIAYEDVVGGEDWNPVEEKIESQTQEEVRDSKENIEKNE
QINDEMKRSGQLGIQEEDLRKESKDQLSDDVSKVIAYLKRLVNAAGSGRLQNGQNGER
ATRLFEKPLDSQSIYQLIEISRNLQIPPEDLIEMLKTGEKPNGSVEPERELDLPVDLD
DISEADLDHPDLFQNRMLSKSGYPKTPGRAGTEALPDGLSVEDILNLLGMESAANQKT
SYFPNPYNQEKVLPRLPYGAGRSRSNQLPKAAWIPHVENRQMAYENLNDKDQELGEYL
ARMLVKYPEIINSNQVKRVPGQGSSEDDLQEEEQIEQAIKEHLNQGSSQETDKLAPVS
KRFPVGPPKNDDTPNRQYWDEDLLMKVLEYLNQEKAEKGREHIAKRAMENM"
BASE COUNT 664 a 398 c 481 g 401 t
ORIGIN
1 aaacggcccg agaagctcgc ccggagaacg gggaggaata tgctgtggag ctcctctgcc
61 atataaacaa aaagaggaaa tctttcaaac atggctgaag caaagaccca ctggcttgga
121 gcagccctgt ctcttatccc tttaattttc ctcatctctg gggctgaagc agcttcattt
181 cagagaaacc agctgcttca gaaagaacca gacctcaggt tggaaaatgt ccaaaagttt
241 cccagtcctg aaatgatcag ggctttggag tacatagaaa acctccgaca acaagctcat
301 aaggaagaaa gcagcccaga ttataatccc taccaaggtg tctctgtccc ccttcagcaa
361 aaagaaaatg gcgatgaaag ccacttgccc gagagggatt cactgagtga agaagactgg
421 atgagaataa tactcgaagc tttgagacag gctgaaaatg agcctcagtc tgcaccaaaa
481 gaaaataagc cctatgcctt gaattcagaa aagaactttc caatggacat gagtgatgat
541 tatgagacac agcagtggcc agaaagaaag cttaagcaca tgcaattccc tcctatgtat
601 gaagagaatt ccagggataa cccctttaaa cgcacaaatg aaatagtgga ggaacaatat
661 actcctcaaa gccttgctac attggaatct gtcttccaag agctggggaa actgacagga
721 ccaaacaacc agaaacgtga gaggatggat gaggagcaaa aactttatac ggatgatgaa
781 gatgatatct acaaggctaa taacattgcc tatgaagatg tggtcggggg agaagactgg
841 aacccagtag aggagaaaat agagagtcaa acccaggaag aggtgagaga cagcaaagag
901 aatatagaaa aaaatgaaca aatcaacgat gagatgaaac gctcagggca gcttggcatc
961 caggaagaag atcttcggaa agagagtaaa gaccaactct cagatgatgt ctccaaagta
1021 attgcctatt tgaaaaggtt agtaaatgct gcaggaagtg ggaggttaca gaatgggcaa
1081 aatggggaaa gggccaccag gctttttgag aaacctcttg attctcagtc tatttatcag
1141 ctgattgaaa tctcaaggaa tttacagata cccccagaag acttaattga gatgctcaaa
1201 actggggaga agccgaatgg atcagtggaa ccggagcggg agcttgacct tcctgttgac
1261 ctagatgaca tctcagaggc tgacttagac catccagacc tgttccaaaa taggatgctc
1321 tccaagagtg gctaccctaa aacacctggt cgtgctggga ctgaggccct accagacggg
1381 ctcagtgttg aggatatttt aaatctttta gggatggaga gtgcagcaaa tcagaaaacg
1441 tcgtattttc ccaatccata taaccaggag aaagttctgc caaggctccc ttatggtgct
1501 ggaagatcta gatcgaacca gcttcccaaa gctgcctgga ttccacatgt tgaaaacaga
1561 cagatggcat atgaaaacct gaacgacaag gatcaagaat taggtgagta cttggccagg
1621 atgctagtta aataccctga gatcattaat tcaaaccaag tgaagcgagt tcctggtcaa
1681 ggctcatctg aagatgacct gcaggaagag gaacaaattg agcaggccat caaagagcat
1741 ttgaatcaag gcagctctca ggagactgac aagctggccc cggtgagcaa aaggttccct
1801 gtggggcccc cgaagaatga tgatacccca aataggcagt actgggatga agatctgtta
1861 atgaaagtgc tggaatacct caaccaagaa aaggcagaaa agggaaggga gcatattgct
1921 aagagagcaa tggaaaatat gtaa
//