LOCUS AK312436 3489 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92782, highly similar to Homo sapiens
damage-specific DNA binding protein 1, 127kDa (DDB1), mRNA.
ACCESSION AK312436
VERSION AK312436.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3489)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3489
/clone="BRAWH3037502"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000431302"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 67..3489
/note="highly similar to Homo sapiens damage-specific DNA
binding protein 1, 127kDa (DDB1), mRNA"
/protein_id="BAG35345.1"
/translation="MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVV
TAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIIT
RAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE
ELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASM
VIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDM
EGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLV
KLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRN
GIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG
FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQV
VVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA
RILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS
DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPL
NSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRI
EVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHT
FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG
KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYL
KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAF
NLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLF
GTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGF
IDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH"
BASE COUNT 845 a 886 c 930 g 828 t
ORIGIN
1 cttttcgctt gtgtccctct ttctagtgtc gcgctcgagt cccgacgggc cgctccaagc
61 ctcgacatgt cgtacaacta cgtggtaacg gcccagaagc ccaccgccgt gaacggctgc
121 gtgaccggac actttacttc ggccgaagac ttaaacctgt tgattgccaa aaacacgaga
181 ttagagatct atgtggtcac cgccgagggg cttcggcctg tcaaagaggt gggcatgtat
241 gggaagattg cggtcatgga gcttttcagg cccaaggggg agagcaagga cctgctgttt
301 atcttgacag cgaagtacaa tgcctgcatc ctggagtata aacagagtgg cgagagcatt
361 gacatcatta cgcgagccca tggcaatgtc caggaccgca ttggccgccc ctcagagacc
421 ggcattattg gcatcattga ccctgagtgc cggatgattg gcctgcgtct ctatgatggc
481 cttttcaagg ttattccact agatcgcgat aataaagaac tcaaggcctt caacatccgc
541 ctggaggagc tgcatgtcat tgatgtcaag ttcctatatg gttgccaagc acctactatt
601 tgctttgtct accaggaccc tcaggggcgg cacgtaaaaa cctatgaggt gtctctccga
661 gaaaaggaat tcaataaggg cccttggaaa caggaaaatg tcgaagctga agcttccatg
721 gtgatcgcag tcccagagcc ctttgggggg gccatcatca ttggacagga gtcaatcacc
781 tatcacaatg gtgacaaata cctggctatt gcccctccta tcatcaagca aagcacgatt
841 gtgtgccaca atcgagtgga ccctaatggc tcaagatacc ttctgggaga catggaaggc
901 cggctcttca tgctgctttt ggagaaggag gaacagatgg atggcaccgt cactctcaag
961 gatctccgtg tagaactcct tggagagacc tctattgctg agtgcttgac ataccttgat
1021 aatggtgttg tgtttgtcgg gtctcgcctg ggtgactccc agcttgtgaa gctcaacgtt
1081 gacagtaatg aacaaggctc ctatgtagtg gccatggaaa cctttaccaa cttaggaccc
1141 attgtcgata tgtgcgtggt ggacctggag aggcaggggc aggggcagct ggtcacttgc
1201 tctggggctt tcaaggaagg ttctttgcgg atcatccgga atggaattgg aatccacgag
1261 catgccagca ttgacttacc aggcatcaaa ggattatggc cactgcggtc tgaccctaat
1321 cgtgagactg atgacacttt ggtgctctct tttgtgggcc agacaagagt tctcatgtta
1381 aatggagagg aggtagaaga aaccgaactg atgggtttcg tggatgatca gcagactttc
1441 ttctgtggca acgtggctca tcagcagctt atccagatca cttcagcatc ggtgaggttg
1501 gtctctcaag aacccaaagc tctggtcagt gaatggaagg agcctcaggc caagaacatc
1561 agtgtggcct cctgcaatag cagccaggtg gtggtggctg taggcagggc cctctactat
1621 ctgcagatcc atcctcagga gctccggcag atcagccaca cagagatgga acatgaagtg
1681 gcttgcttgg acatcacccc attaggagac agcaatggac tgtcccctct ttgtgccatt
1741 ggcctctgga cggacatctc ggctcgtatc ttgaagttgc cctcttttga actactgcac
1801 aaggagatgc tgggtggaga gatcattcct cgctccatcc tgatgaccac ctttgagagt
1861 agccattacc tcctttgtgc cttgggagat ggagcgcttt tctactttgg gctcaacatt
1921 gagacaggtc tgttgagcga ccgtaagaag gtgactttgg gcacccagcc caccgtattg
1981 aggacttttc gttctctttc taccaccaac gtctttgctt gttctgaccg ccccactgtc
2041 atctatagca gcaaccacaa attggtcttc tcaaatgtca acctcaagga agtgaactac
2101 atgtgtcccc tcaattcaga tggctatcct gacagcctgg cgctggccaa caatagcacc
2161 ctcaccattg gcaccatcga tgagatccag aagctgcaca ttcgcacagt tcccctctat
2221 gagtctccaa ggaagatctg ctaccaggaa gtgtcccagt gtttcggggt cctctccagc
2281 cgcattgaag tccaagacac gagtgggggc acgacagcct tgaggcccag cgctagcacc
2341 caggctctgt ccagcagtgt aagctccagc aagctgttct ccagcagcac tgctcctcat
2401 gagacctcct ttggagaaga ggtggaggtg cacaacctac ttatcattga ccaacacacc
2461 tttgaagtgc ttcatgccca ccagtttctg cagaatgaat atgccctcag tctggtttcc
2521 tgcaagctgg gcaaagaccc caacacttac ttcattgtgg gcacagcaat ggtgtatcct
2581 gaagaggcag agcccaagca gggtcgcatt gtggtctttc agtattcgga tggaaaacta
2641 cagactgtgg ctgaaaagga agtgaaaggg gccgtgtact ctatggtgga atttaacggg
2701 aagctgttag ccagcatcaa tagcacggtg cggctctatg agtggacaac agagaaggag
2761 ctgcgcactg agtgcaacca ctacaacaac atcatggccc tctacctgaa gaccaagggc
2821 gacttcatcc tggtgggcga ccttatgcgc tcagtgctgc tgcttgccta caagcccatg
2881 gaaggaaact ttgaagagat tgctcgagac tttaatccca actggatgag tgctgtggaa
2941 atcttggatg atgacaattt tctgggggct gaaaatgcct ttaacttgtt tgtgtgtcaa
3001 aaggatagcg ctgccaccac tgacgaggag cggcagcacc tccaggaggt tggtcttttc
3061 cacctgggcg agtttgtcaa tgtcttttgc cacggctctc tggtaatgca gaatctgggt
3121 gagacttcca cccccacaca aggctcggtg ctcttcggca cggtcaacgg catgataggg
3181 ctggtgacct cactgtcaga gagctggtac aacctcctgc tggacatgca gaatcgactc
3241 aataaagtca tcaaaagtgt ggggaagatc gagcactcct tctggagatc ctttcacacc
3301 gagcggaaga cagaaccagc cacaggtttc atcgacggtg acttgattga gagtttcctg
3361 gatattagcc gccccaagat gcaggaggtg gtggcaaacc tacagtatga cgatggcagc
3421 ggtatgaagc gagaggccac tgcagacgac ctcatcaagg ttgtggagga gctaactcgg
3481 atccattag
//