LOCUS AK312425 2396 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92767, highly similar to Homo sapiens
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase 7 (GALNT7), mRNA.
ACCESSION AK312425
VERSION AK312425.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2396)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2396
/clone="BRAWH3035303"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000431291"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 477..2396
/note="highly similar to Homo sapiens
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase 7 (GALNT7), mRNA"
/protein_id="BAG35335.1"
/translation="MLLRKRYRHRPCRLQFLLLLLMLGCVLMMVAMLHPPHHTLHQTV
TAQASKHSPEARYRLDFGESQDWVLEAEDEGEEYSPLEGLPPFISLREDQLLVAVALP
QARRNQSQGRRGGSYRLIKQPRRQDKEAPKRDWGADEDGEVSEEEELTPFSLDPRGLQ
EALSARIPLQRALPEVRHPLCLQQHPQDSLPTASVILCFHDEAWSTLLRTVHSILDTV
PRAFLKEIILVDDLSQQGQLKSALSEYVARLEGVKLLRSNKRLGAIRARMLGATRATG
DVLVFMDAHCECHPGWLEPLLSRIAGDRSRVVSPVIDVIDWKTFQYYPSKDLQRGVLD
WKLDFHWEPLPEHVRKALQSPISPIRSPVVPGEVVAMDRHYFQNTGAYDSLMSLRGGE
NLELSFKAWLCGGSVEILPCSRVGHIYQNQDSHSPLDQEATLRNRVRIAETWLGSFKE
TFYKHSPEAFSLSKAEKPDCMERLQLQRRLGCRTFHWFLANVYPELYPSEPRPSFSGK
LHNTGLGLCADCQAEGDILGCPMVLAPCSDSRQQQYLQHTSRKEIHFGSPQHLCFAVR
QEQVILQNCTEEGLAIHQQHWDFQENGMIVHILSGKCMEAVVQENNKDLYLRPCDGKA
RQQWRFDQINAVDER"
BASE COUNT 574 a 644 c 694 g 484 t
ORIGIN
1 ttttacatct gttgatctga cctgactgga agcgtccaaa gagggacggc tgtcagccct
61 gcttgactga gaacccacca gctcatccca gacacctcat agcaacctat ttatacaaag
121 ggggaaagaa acacctgagc agaatggaat cattattttt ttcccaagga gaaaaccggg
181 gtaaagggag ggaagcaatt caatttgaag tccctgtgaa tgggctttca gaaggcaatt
241 aaagaaatcc actcagagag gacttggggt gaaacttggg tcctgtggtt ctctgattgt
301 aagtggaagc aggtcttgca cacgctgttg gcaaatgtca ggaccaggtt aagtgactgg
361 cagaaaaact tccaggtgga acaagcaacc caggttctgc tgcaagcttg aaggagcctg
421 gagcgggaga aagctaactt gaacatgacc tgttgcattt ggcaagttct agcaacatgc
481 tcctaaggaa gcgatacagg cacagaccat gcagactcca gttcctcctg ctgctcctga
541 tgctgggatg cgtcctgatg atggtggcga tgttgcaccc tccccaccac accctgcacc
601 agactgtcac agcccaagcc agcaagcaca gccctgaagc caggtaccgc ctggactttg
661 gggaatccca ggattgggta ctggaagctg aggatgaggg tgaagagtac agccctctgg
721 agggcctgcc accctttatc tcactgcggg aggatcagct gctggtggcc gtggccttac
781 cccaggccag aaggaaccag agccagggca ggagaggtgg gagctaccgc ctcatcaagc
841 agccaaggag gcaggataag gaagccccaa agagggactg gggggctgat gaggacgggg
901 aggtgtctga agaagaggag ttgaccccgt tcagcctgga cccacgtggc ctccaggagg
961 cactcagtgc ccgcatcccc ctccagaggg ctctgcccga ggtgcggcac ccactgtgtc
1021 tgcagcagca ccctcaggac agcctgccca cagccagcgt catcctctgt ttccatgatg
1081 aggcctggtc cactctcctg cggactgtac acagcatcct cgacacagtg cccagggcct
1141 tcctgaagga gatcatcctc gtggacgacc tcagccagca aggacaactc aagtctgctc
1201 tcagcgaata tgtggccagg ctggaggggg tgaagttact caggagcaac aagaggctgg
1261 gtgccatcag ggcccggatg ctgggggcca ccagagccac cggggatgtg ctcgtcttca
1321 tggatgccca ctgcgagtgc cacccaggct ggctggagcc cctcctcagc agaatagctg
1381 gtgacaggag ccgagtggta tctccggtga tagatgtgat tgactggaag actttccagt
1441 attacccctc aaaggacctg cagcgtgggg tgttggactg gaagctggat ttccactggg
1501 aacctttgcc agagcatgtg aggaaggccc tccagtcccc cataagcccc atcaggagcc
1561 ctgtggtgcc cggagaggtg gtggccatgg acagacatta cttccaaaac actggagcgt
1621 atgactctct tatgtcgctg cgaggtggtg aaaacctcga actgtctttc aaggcctggc
1681 tctgtggtgg ctctgttgaa atccttccct gctctcgggt aggacacatc taccaaaatc
1741 aggattccca ttcccccctc gaccaggagg ccaccctgag gaacagggtt cgcattgctg
1801 agacctggct ggggtcattc aaagaaacct tctacaagca tagcccagag gccttctcct
1861 tgagcaaggc tgagaagcca gactgcatgg aacgcttgca gctgcaaagg agactgggtt
1921 gtcggacatt ccactggttt ctggctaatg tctaccctga gctgtaccca tctgaaccca
1981 ggcccagttt ctctggaaag ctccacaaca ctggacttgg gctctgtgca gactgccagg
2041 cagaagggga catcctgggc tgtcccatgg tgttggctcc ttgcagtgac agccggcagc
2101 aacagtacct gcagcacacc agcaggaagg agattcactt tggcagccca cagcacctgt
2161 gctttgctgt caggcaggag caggtgattc ttcagaactg cacggaggaa ggcctggcca
2221 tccaccagca gcactgggac ttccaggaga atgggatgat tgtccacatt ctttctggga
2281 aatgcatgga agctgtggtg caagaaaaca ataaagattt gtacctgcgt ccttgtgatg
2341 gaaaagcccg ccagcagtgg cgttttgacc agatcaatgc tgtggatgaa cgatga
//