LOCUS AK312397 2714 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92729, highly similar to Homo sapiens
hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) (HIF1A), mRNA.
ACCESSION AK312397
VERSION AK312397.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2714)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2714
/clone="BRAMY3018425"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000431263"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 234..2714
/note="highly similar to Homo sapiens hypoxia-inducible
factor 1, alpha subunit (basic helix-loop-helix
transcription factor) (HIF1A), mRNA"
/protein_id="BAG35314.1"
/translation="MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQL
PLPHNVSSHLDKASVMRLTISYLRVRKLLDAGDLDIEDDMKAQMNCFYLKALDGFVMV
LTDDGDMIYISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKE
QNTQRSFFLRMKCTLTSRGRTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMT
CLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIY
EYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQC
IVCVNYVVSGIIQHDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLKK
EPDALTLLAPAAGDTIISLDFGSNDTETDDQQLEEVLLYNDVMLPSPNEKLQNINLAM
SPLPTAETPKPLRSSADPALNQEVALKLEPNPESLELSFTMPQIQDQTPSPSDGSTRQ
SSPEPNSPSEYCFYVDSDMVNEFKLELVEKLFAEDTEAKNPFSTQDTDLDLEMLAPYI
PMDDDFQLRSFDQLSPLESSSASPESASPQSTVTVFQQTQIQEPTANATTTTATTDEL
KTVTKDRMEDIKILIASPSPTHIHKETTSATSSPYRDTQSRTASPNRAGKGVIEQTEK
SHPRSPNVLSVALSQRTTVPEEELNPKILALQNAQRKRKMEHDGSLFQAVGIGTLLQQ
PDDHAATTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACRLLGQSMDESGLPQLTSY
DCEVNAPIQGSRNLLQGEELLRALDQVN"
BASE COUNT 859 a 597 c 576 g 682 t
ORIGIN
1 cagtgtgtcg ggctgggccc tgacaagcca cctgaggaga ggctcggagc cgggcccgga
61 ccccggcgat tgccgcccgc ttctctctag tctcacgagg ggtttcccgc ctcgcacccc
121 cacctctgga cttgcctttc cttctcttct ccgcgtgtgg agggagccag cgcttaggcc
181 ggagcgagcc tgggggccgc ccgccgtgaa gacatcgcgg ggaccgattc accatggagg
241 gcgccggcgg cgcgaacgac aagaaaaaga taagttctga acgtcgaaaa gaaaagtctc
301 gagatgcagc cagatctcgg cgaagtaaag aatctgaagt tttttatgag cttgctcatc
361 agttgccact tccacataat gtgagttcgc atcttgataa ggcctctgtg atgaggctta
421 ccatcagcta tttgcgtgtg aggaaacttc tggatgctgg tgatttggat attgaagatg
481 acatgaaagc acagatgaat tgcttttatt tgaaagcctt ggatggtttt gttatggtcc
541 tcacagatga tggtgacatg atttacattt ctgataatgt gaacaaatac atgggattaa
601 ctcagtttga actaactgga cacagtgtgt ttgattttac tcatccatgt gaccatgagg
661 aaatgagaga aatgcttaca cacagaaatg gccttgtgaa aaagggtaaa gaacaaaaca
721 cacagcgaag cttttttctc agaatgaagt gtaccctaac tagccgagga agaactatga
781 acataaagtc tgcaacatgg aaggtattgc actgcacagg ccacattcac gtatatgata
841 ccaacagtaa ccaacctcag tgtgggtata agaaaccacc tatgacctgc ttggtgctga
901 tttgtgaacc cattcctcac ccatcaaata ttgaaattcc tttagatagc aagactttcc
961 tcagtcgaca cagcctggat atgaaatttt cttattgtga tgaaagaatt accgaattga
1021 tgggatatga gccagaagaa cttttaggcc gctcaattta tgaatattat catgctttgg
1081 actctgatca tctgaccaaa actcatcatg atatgtttac taaaggacaa gtcaccacag
1141 gacagtacag gatgcttgcc aaaagaggtg gatatgtctg ggttgaaact caagcaactg
1201 tcatatataa caccaagaat tctcaaccac agtgcattgt atgtgtgaat tacgttgtga
1261 gtggtattat tcagcacgac ttgattttct cccttcaaca aacagaatgt gtccttaaac
1321 cggttgaatc ttcagatatg aaaatgactc agctattcac caaagttgaa tcagaagata
1381 caagtagcct ctttgacaaa cttaagaagg aacctgatgc tttaactttg ctggccccag
1441 ccgctggaga cacaatcata tctttagatt ttggcagcaa cgacacagaa actgatgacc
1501 agcaacttga ggaagtacta ttatataatg atgtaatgct cccctcaccc aacgaaaaat
1561 tacagaatat aaatttggca atgtctccat tacccaccgc tgaaacgcca aagccacttc
1621 gaagtagtgc tgaccctgca ctcaatcaag aagttgcatt aaaattagaa ccaaatccag
1681 agtcactgga actttctttt accatgcccc agattcagga tcagacacct agtccttccg
1741 atggaagcac tagacaaagt tcacctgagc ctaatagtcc cagtgaatat tgtttttatg
1801 tggatagtga tatggtcaat gaattcaagt tggaattggt agaaaaactt tttgctgaag
1861 acacagaagc aaagaaccca ttttctactc aggacacaga tttagacttg gagatgttag
1921 ctccctatat cccaatggat gatgacttcc agttacgttc cttcgatcag ttgtcaccat
1981 tagaaagcag ttccgcaagc cctgaaagcg caagtcctca aagcacagtt acagtattcc
2041 agcagactca aatacaagaa cctactgcta atgccaccac taccactgcc accactgatg
2101 aattaaaaac agtgacaaaa gaccgtatgg aagacattaa aatattgatt gcatctccat
2161 ctcctaccca catacataaa gaaactacta gtgccacatc atcaccatat agagatactc
2221 aaagtcggac agcctcacca aacagagcag gaaaaggagt catagaacag acagaaaaat
2281 ctcatccaag aagccctaac gtgttatctg tcgctttgag tcaaagaact acagttcctg
2341 aggaagaact aaatccaaag atactagctt tgcagaatgc tcagagaaag cgaaaaatgg
2401 aacatgatgg ttcacttttt caagcagtag gaattggaac attattacag cagccagacg
2461 atcatgcagc tactacatca ctttcttgga aacgtgtaaa aggatgcaaa tctagtgaac
2521 agaatggaat ggagcaaaag acaattattt taataccctc tgatttagca tgtagactgc
2581 tggggcaatc aatggatgaa agtggattac cacagctgac cagttatgat tgtgaagtta
2641 atgctcctat acaaggcagc agaaacctac tgcagggtga agaattactc agagctttgg
2701 atcaagttaa ctga
//