LOCUS AK312313 2913 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92620, highly similar to Homo sapiens
staphylococcal nuclease domain containing 1 (SND1),mRNA.
ACCESSION AK312313
VERSION AK312313.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2913)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2913
/clone="BRACE3017079"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000431179"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 256..2913
/note="highly similar to Homo sapiens staphylococcal
nuclease domain containing 1 (SND1),mRNA"
/protein_id="BAG35238.1"
/translation="MVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAAATQPD
AKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESL
VAEGLATRREGMRANNPEQNRLSECEEQAKAAKKGMWSEGNGSHTIRDLKYTIENPRH
FVDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEP
FAAEAKFFTESRLLQRDVQIILESCHNQNILGTILHPNGNITELLLKEGFARCVDWSI
AVYTRGAEKLRAAERFAKERRLRIWRDYVAPTANLDQKDKQFVAKVMQVLNADAIVVK
LNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNV
TVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSH
YDELLAAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEY
VFSGSRLKLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQ
REVEVEVESMDKAGNFIGWLHIDGANLSVLLVEHALSKVHFTAERSSYYKSLLSAEEA
AKQKKEKVWAHYEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQL
EKLMENMRNDIASHPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYID
YGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVDSVVRDIQN
TQCLLNVEHLSAGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYLNA
QESAKSARLNLWRYGDFRADDADEFGYSR"
BASE COUNT 719 a 786 c 812 g 596 t
ORIGIN
1 ttttttcgct ccgtgtcccg ctgctgctcc tgtgagcgcc cggcgagtcc gtcccgtcca
61 ccgtccgcag ctggtagcca gcctgcccct cgcctcgact ccctttcacc aacaccgaca
121 cccacattga cacctccagt ccggccagcc gctccactcg ttgcctttgc atctccacac
181 atggcgtcct ccgcgcagag cggcggctcc tccgggggac ccgcggtccc caccgtgcag
241 cggggcatca tcaagatggt cctctcaggg tgcgccatca ttgtccgagg tcagcctcgt
301 ggtgggcctc ctcctgagcg gcagatcaac ctcagcaaca ttcgtgctgg aaatcttgct
361 cgccgggcag ccgccacaca acctgatgca aaggataccc ctgatgagcc ctgggcattt
421 ccagctcgag agttccttcg aaagaagctg attgggaagg aagtctgttt cacgatagaa
481 aacaagactc cccaggggcg agagtatggc atgatctacc ttggaaaaga taccaatggg
541 gaaaacattg cagaatcact ggttgcagag ggcttagcca cccggagaga aggcatgaga
601 gctaataatc ctgagcagaa ccggctttca gaatgtgaag aacaagcaaa ggcagccaag
661 aaagggatgt ggagtgaggg gaacggttca catactatcc gggatctcaa gtataccatt
721 gaaaacccaa ggcactttgt ggactcacac caccagaagc ctgttaatgc tatcatcgag
781 catgtgcggg acggcagtgt ggtcagggcc ctgctcctcc cagattacta cctggttaca
841 gtcatgctgt caggcatcaa gtgcccaact tttcgacggg aagcagatgg cagtgaaact
901 ccagagcctt ttgctgcaga agccaaattt ttcactgagt cgcgactgct tcagagagat
961 gttcagatca ttctggagag ctgccacaac cagaacattc tgggtaccat ccttcatcca
1021 aatggcaaca tcacagagct cctcctgaag gaaggtttcg cacgctgtgt ggactggtcg
1081 attgcagttt acacccgggg cgcagaaaag ctgagggcgg cagagaggtt tgccaaagag
1141 cgcaggctga gaatatggag agactatgtg gctcccacag ctaatttgga ccaaaaggac
1201 aagcagtttg ttgccaaggt gatgcaggtt ctgaatgctg atgccattgt tgtgaagctg
1261 aactcaggcg attacaagac gattcacctg tccagcatcc gaccaccgag gctggagggg
1321 gagaacaccc aggataagaa caagaaactg cgtcccctgt atgacattcc ttacatgttt
1381 gaggcccggg aatttcttcg aaaaaagctt attgggaaga aggtcaatgt gacggtggac
1441 tacattagac cagccagccc agccacagag acagtgcctg ccttttcaga gcgtacctgt
1501 gccactgtca ccattggagg aataaacatt gctgaggctc ttgtcagcaa aggtctagcc
1561 acagtgatca gataccggca ggatgatgac cagagatcat cacactacga tgaactgctt
1621 gctgcagagg ccagagctat taagaatggc aaaggattgc atagcaagaa ggaagtgcct
1681 atccaccgtg ttgcagatat atctggggat acccaaaaag caaagcagtt cctgcctttt
1741 cttcagcggg caggtcgttc tgaagctgtg gtggaatacg tcttcagtgg ttctcgtctc
1801 aaactctatt tgccaaagga aacttgcctt atcaccttct tgcttgcagg cattgaatgc
1861 cccagaggag cccgaaacct cccaggcttg gtgcaggaag gagagccctt cagcgaggaa
1921 gctacacttt tcaccaagga actggtgctg cagcgagagg tggaggtgga ggtggagagc
1981 atggacaagg ccggcaactt tatcggctgg ctgcacatcg acggtgccaa cctgtccgtc
2041 ctgctggtgg agcacgcgct ctccaaggtc cacttcaccg ccgaacgcag ctcctactac
2101 aagtccctgc tgtctgccga ggaggccgca aagcagaaga aagagaaggt ctgggcccac
2161 tatgaggagc agcccgtgga ggaggtgatg ccagtgctgg aggagaagga gcgatctgct
2221 agctacaagc ccgtgtttgt gaccgagatc actgatgacc tgcacttcta cgtgcaggat
2281 gtggagaccg gcacccagtt ggagaagctg atggagaaca tgcgcaatga cattgccagt
2341 cacccccctg tagagggctc ctatgccccc cgcaggggag agttctgcat tgccaaattt
2401 gtagatggag aatggtaccg tgcccgagta gagaaagtcg agtctcctgc caaaatacat
2461 gtcttctaca ttgactacgg caacagagag gtcctgccat ccacccgcct gggtacccta
2521 tcacctgcct tcagcactcg ggtgctgcca gctcaagcca cggagtatgc cttcgccttc
2581 atccaggtgc cccaagatga tgatgcccgc acggacgccg tggacagcgt agttcgggat
2641 atccagaaca ctcagtgcct gctcaacgtg gaacacctga gtgccggctg cccccatgtc
2701 accctgcagt ttgcagattc caagggcgat gtggggctgg gcttggtgaa ggaagggctg
2761 gtcatggtgg aggtgcgcaa ggagaaacag ttccagaaag tgatcacaga atacctgaat
2821 gcccaagagt cagccaagag cgccaggctg aacctgtggc gctatggaga ctttcgagct
2881 gatgatgcag acgaatttgg ctacagccgc taa
//