LOCUS AK312267 1436 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92563, Homo sapiens vitamin D (1,25-
dihydroxyvitamin D3) receptor (VDR),mRNA.
ACCESSION AK312267
VERSION AK312267.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1436)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1436
/cell_type="normal astrocytes (NHA5732)"
/clone="ASTRO3000257"
/clone_lib="ASTRO3"
/db_xref="H-InvDB:HIT000431133"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal astrocytes"
/organism="Homo sapiens"
CDS 153..1436
/note="Homo sapiens vitamin D (1,25- dihydroxyvitamin D3)
receptor (VDR),mRNA"
/protein_id="BAG35198.1"
/translation="MEAMAASTSLPDPGDFDRNVPRICGVCGDRATGFHFNAMTCEGC
KGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQR
KREMILKRKEEEALKDSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVN
DGGGSHPSRPNSRHTPSFSGDSSSSCSDHCITSSDMMDSSSFSNLDLSEEDSDDPSVT
LELSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSN
ESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLM
AICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRS
LNEEHSKQYRCLSFQPECSMKLTPLVLEVFGNEIS"
BASE COUNT 320 a 444 c 388 g 284 t
ORIGIN
1 aaaaaggcgg cagcggagcc gtgtgcgccg ggagcgcgga acagcttgtc cacccgccgg
61 ccggaccaga agcctttggg tctgaagtgt ctgtgagacc tcacagaaga gcacccctgg
121 gctccactta cctgccccct gctccttcag ggatggaggc aatggcggcc agcacttccc
181 tgcctgaccc tggagacttt gaccggaacg tgccccggat ctgtggggtg tgtggagacc
241 gagccactgg ctttcacttc aatgctatga cctgtgaagg ctgcaaaggc ttcttcaggc
301 gaagcatgaa gcggaaggca ctattcacct gccccttcaa cggggactgc cgcatcacca
361 aggacaaccg acgccactgc caggcctgcc ggctcaaacg ctgtgtggac atcggcatga
421 tgaaggagtt cattctgaca gatgaggaag tgcagaggaa gcgggagatg atcctgaagc
481 ggaaggagga ggaggccttg aaggacagtc tgcggcccaa gctgtctgag gagcagcagc
541 gcatcattgc catactgctg gacgcccacc ataagaccta cgaccccacc tactccgact
601 tctgccagtt ccggcctcca gttcgtgtga atgatggtgg agggagccat ccttccaggc
661 ccaactccag acacactccc agcttctctg gggactcctc ctcctcctgc tcagatcact
721 gtatcacctc ttcagacatg atggactcgt ccagcttctc caatctggat ctgagtgaag
781 aagattcaga tgacccttct gtgaccctag agctgtccca gctctccatg ctgccccacc
841 tggctgacct ggtcagttac agcatccaaa aggtcattgg ctttgctaag atgataccag
901 gattcagaga cctcacctct gaggaccaga tcgtactgct gaagtcaagt gccattgagg
961 tcatcatgtt gcgctccaat gagtccttca ccatggacga catgtcctgg acctgtggca
1021 accaagacta caagtaccgc gtcagtgacg tgaccaaagc cggacacagc ctggagctga
1081 ttgagcccct catcaagttc caggtgggac tgaagaagct gaacttgcat gaggaggagc
1141 atgtcctgct catggccatc tgcatcgtct ccccagatcg tcctggggtg caggacgccg
1201 cgctgattga ggccatccag gaccgcctgt ccaacacact gcagacgtac atccgctgcc
1261 gccacccgcc cccgggcagc cacctgctct atgccaagat gatccagaag ctagccgacc
1321 tgcgcagcct caatgaggag cactccaagc agtaccgctg cctctccttc cagcctgagt
1381 gcagcatgaa gctaacgccc cttgtgctcg aagtgtttgg caatgagatc tcctga
//