LOCUS AK304878 1588 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60227 complete cds, highly similar to
Peroxisome proliferator-activated receptor delta.
ACCESSION AK304878
VERSION AK304878.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1588)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1588
/cell_type="umbilical vein endothelial cells (HUVEC)"
/clone="VESEN1000426"
/clone_lib="VESEN1"
/db_xref="H-InvDB:HIT000499502"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, endothelial cells"
/organism="Homo sapiens"
CDS 273..1304
/codon_start=1
/note="highly similar to Peroxisome
proliferator-activated receptor delta"
/protein_id="BAG65615.1"
/transl_table=1
/translation="MEQPQEEAPEVREEEEKEEVAEAEGAPELNGGPQHALPSSSYTA
IRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFDMTKKKARSI
LTGKASHTAPFVIHDIKTLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVETVR
ELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREF
LRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQ
DTILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPL
LQEIYKDMY"
BASE COUNT 351 a 481 c 435 g 321 t
ORIGIN
1 gattaatggg aaaagttttg gcaggagcgg gagaattctg cggagcctgc gggacggcgg
61 cggtggcgcc gtaggcagcc gggacagtgt tgtacagtgt tttgggcatg cacgtgatac
121 tcacacagtg gcttctgctc accaacagat gaagacagat gcaccaacga ggctgatggg
181 aaccatcctg tagaggtcca tctgcgttca gacccagacg atgccagagc tatgactggg
241 cctgcaggtg tggcgccgag gggagatcag ccatggagca gccacaggag gaagcccctg
301 aggtccggga agaggaggag aaagaggaag tggcagaggc agaaggagcc ccagagctca
361 atgggggacc acagcatgca cttccttcca gcagctacac agctatccgt tttggtcgga
421 tgccggaggc tgagaagagg aagctggtgg cagggctgac tgcaaatgag gggagccagt
481 acaacccaca ggtggccgac ctgaaggcct tctccaagca catctacaat gcctacctga
541 aaaacttcga catgaccaaa aagaaggccc gcagcatcct caccggcaaa gccagccaca
601 cggcgccctt tgtgatccac gacatcaaga cattgtggca ggcagagaag gggctggtgt
661 ggaagcagtt ggtgaatggc ctgcctccct acaaggagat cagcgtgcac gtcttctacc
721 gctgccagtg caccacagtg gagaccgtgc gggagctcac tgagttcgcc aagagcatcc
781 ccagcttcag cagcctcttc ctcaacgacc aggttaccct tctcaagtat ggcgtgcacg
841 aggccatctt cgccatgctg gcctctatcg tcaacaagga cgggctgctg gtagccaacg
901 gcagtggctt tgtcacccgt gagttcctgc gcagcctccg caaacccttc agtgatatca
961 ttgagcctaa gtttgaattt gctgtcaagt tcaacgccct ggaacttgat gacagtgacc
1021 tggccctatt cattgcggcc atcattctgt gtggagaccg gccaggcctc atgaacgttc
1081 cacgggtgga ggctatccag gacaccatcc tgcgtgccct cgaattccac ctgcaggcca
1141 accaccctga tgcccagtac ctcttcccca agctgctgca gaagatggct gacctgcggc
1201 aactggtcac cgagcacgcc cagatgatgc agcggatcaa gaagaccgaa accgagacct
1261 cgctgcaccc tctgctccag gagatctaca aggacatgta ctaacggcgg cacccaggcc
1321 tccctgcaga ctccaatggg gccagcactg gaggggccca cccacatgac ttttccattg
1381 accagccctt gagcacccgg cctggagcag cagagtccca cgatcgccct cagacacatg
1441 acacccacgg cctctggctc cctgtgccct ctctcccgct tcctccagcc agctctcttc
1501 ctgtctttgt tgtctccctc tttctcagtt cctctttctt ttctaattcc tgttgctctg
1561 tttcttcctt tctgtaggtt tctctctt
//