LOCUS AK304863 1814 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51473 complete cds, highly similar to
Junctophilin-2.
ACCESSION AK304863
VERSION AK304863.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1814)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1814
/clone="UTERU3021167"
/clone_lib="UTERU3"
/db_xref="H-InvDB:HIT000499487"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 392..1609
/codon_start=1
/note="highly similar to Junctophilin-2"
/protein_id="BAG65601.1"
/transl_table=1
/translation="MGEWKNDKRSGFGVSERSSGLRYEGEWLDNLRHGYGCTTLPDGH
REEGKYRHNVLVKDTKRRMLQLKSNKVRQKVEHSVEGAQRAAAIARQKAEIAASRTSH
AKAKAEAAEQAALAANQESNIARTLARELAPDFYQPGPEYQKRRLLQEILENSESLLE
PPDRGAGAAGLPQPPRESPQLHERETPRPEGGSPSPAGTPPQPKRPRPGVSKDGLLSP
GAWNGEPSGEGSRSVTPSEGAGRRSPARPATERMAIEALQAPPAPSREPEVALYQGYH
SYAVRTTPPEPPPFEDQPEPEVSGSESAPSSPATAPLQAPTLRGPEPARETPAKLEPK
PIIPKAEPRAKARKTEARGLTKAGAKKKARKEAALAAEAEVEVEEVPNTILICMVILL
NIGLAILFVHLLT"
BASE COUNT 329 a 648 c 610 g 227 t
ORIGIN
1 ggagaagggg gccagcgggc tgcgggaatt cagcctccgg cgggggctgc caccgagggg
61 aatttaccct ctttgaaaag gctggggacc cctccacccc accctttcac tgggcttcgc
121 gctcagcctc ctggccaatg ccgaggcggc cgcgcgggcg cccaagggcg gcggcctctt
181 ccagcggggc gcgctgctgg gcaagctgcg gcgcgcagag tcgcgcacgt ccgtgggtag
241 ccagcgcagc cgtgtcagct tccttaagag cgacctcagc tcgggcgcca gcgacgccgc
301 gtccaccgcc agcctgggag aggccgccga gggcgccgac gaggccgcac ccttcgaggc
361 cgatatcgac gccaccacca ccgagaccta catgggcgag tggaagaacg acaaacgctc
421 gggcttcggc gtgagcgaac gctccagtgg cctccgctac gagggcgagt ggctggacaa
481 cctgcgccac ggctatggct gcaccacgct gcccgacggc caccgcgagg agggcaagta
541 ccgccacaac gtgctggtca aggacaccaa gcgccgcatg ctgcagctca agagcaacaa
601 ggtccgccag aaagtggagc acagtgtgga gggtgcccag cgcgccgctg ctatcgcgcg
661 ccagaaggcc gagattgccg cctccaggac aagccacgcc aaggccaaag ctgaggcagc
721 ggaacaggcc gccctggctg ccaaccagga gtccaacatt gctcgcactt tggccaggga
781 gctggctccg gacttctacc agccaggtcc ggaatatcag aagcgccggc tgctgcagga
841 gatcctggag aactcggaga gcctgctgga gccccccgac cggggcgccg gcgcagcggg
901 cctcccacag ccgccccgcg agagcccgca gctgcacgag cgtgagaccc ctcggcccga
961 gggtggctcc ccgtcaccgg ccgggacgcc cccgcagccc aagcggccca ggcccggggt
1021 gtccaaggac ggcctgctga gcccaggcgc ctggaacggc gagcccagcg gtgagggcag
1081 ccggtcagtc actccgtccg agggcgcggg ccgccgcagc cccgcgcgtc cagccaccga
1141 gcgcatggcc atcgaggctc tgcaggcacc gcctgcgccg tcgcgggagc cggaggtggc
1201 gctttaccag ggctaccaca gctatgctgt gcgcaccacg ccgcccgagc ccccaccctt
1261 tgaggaccag cccgagcccg aggtctccgg gtccgagtcc gcgccctcgt ccccggccac
1321 cgccccgctg caggccccca cgctccgagg ccccgagcct gcacgcgaga cccccgccaa
1381 gctggagccc aagcccatca tccccaaagc cgagcccagg gccaaggccc gcaagactga
1441 ggctcgaggg ctgaccaagg cgggggccaa gaagaaggcg cggaaggagg ccgcactggc
1501 ggcagaggcg gaggtggagg tggaagaggt ccccaacacc atcctcatct gcatggtgat
1561 cctgctgaac atcggcctgg ccatcctctt tgttcacctc ctgacctgac cgtcgcttac
1621 cagagccaga agttcctgct gaggacatga ggacccgtct ttttgcagtg ccaggcaggg
1681 tggccaaaga ggactggact ctggacctgg agccccgtgg tccagttcac attcacccca
1741 caagagtttc aggaggcctc ccacggtgcc tgtgctgggt ggcggtggtg gtgccaagag
1801 gaatggaatg tcct
//