LOCUS AK304813 3187 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61580 complete cds, highly similar to
Calsyntenin-1 precursor.
ACCESSION AK304813
VERSION AK304813.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3187)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3187
/clone="UTERU3016110"
/clone_lib="UTERU3"
/db_xref="H-InvDB:HIT000499437"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 36..2924
/codon_start=1
/note="highly similar to Calsyntenin-1 precursor"
/protein_id="BAG65563.1"
/transl_table=1
/translation="MLRRPAPALAPAARLLLAGLLCGGGVWAARVNKHKPWLEPTYHG
IVTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVD
KSTGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEY
APVFKEKSYKATVIEGKQYDSILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGY
IKNTEKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEP
GTGALAVFPNIHLETCDEPVASVQATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGT
AELLPSPSGSLNWTMGLPTDNGHDSDQVFEFNGTQAVRIPDGVVSVSPKEPFTISVWM
RHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLIFLFRQDPSEEKKYRPAEFHWKL
NQVCDEEWHHYVLNVEFPSVTLYVDGTSHEPFSVTEDYPLHPSKIETQLVVGACWQGG
DLHMTQFFRGNLAGLTLRSGKLADKKVIDCLYTCKEGLDLQVLEDSGRGVQIQAHPSQ
LVLTLEGEDLGELDKAMQHISYLNSRQFPTPGIRRLKITSTIKCFNEATCISVPPVDG
YVMVLQPEEPKISLSGVHHFARAASEFESSEGVFLFPELRIISTITREVEPEGDGAED
PTVQESLVSEEIVHDLDTCEVTVEGEELNHEQESLEVDMARLQQKGIEVSSSELGMTF
TGVDTMASYEEVLHLLRYRNWHARSLLDRKFKLICSELNGRYISNEFKVEVNVIHTAN
PMEHANHMAAQPQFVHPEHRSFVDLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMI
ILGVFRIRAAHRRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEE
EESEDGEEEDDITSAESESSEEEEGEQGDPQNATRQQQLEWDDSTLSY"
BASE COUNT 752 a 906 c 920 g 609 t
ORIGIN
1 atcttagttg ctgccgctcc cgccccgggc tggcgatgct gcgccgcccc gctcccgcgc
61 tggccccggc cgcccggctg ctgctggccg ggctgctgtg cggcggcggg gtctgggccg
121 cgcgagttaa caagcacaag ccctggctgg agcccaccta ccacggcata gtcacagaga
181 acgacaacac cgtgctcctc gaccccccac tgatcgcgct ggataaagat gcgcctctgc
241 gatttgcaga gagttttgag gtgacagtca ccaaagaagg tgagatttgt ggatttaaaa
301 ttcacgggca gaatgtcccc tttgatgcag tggtagtgga taaatccact ggtgagggag
361 tcattcgctc caaagagaaa ctggactgtg agctgcagaa agactattca ttcaccatcc
421 aggcctatga ttgtgggaag ggacctgatg gcaccaacgt gaaaaagtct cataaagcaa
481 ctgttcatat tcaggtgaac gacgtgaatg agtacgcgcc cgtgttcaag gagaagtcct
541 acaaagccac ggtcatcgag gggaagcagt acgacagcat tttgagggtg gaggccgtgg
601 atgccgactg ctcccctcag ttcagccaga tttgcagcta cgaaatcatc actccagacg
661 tgccctttac tgttgacaaa gatggttata taaaaaacac agagaaatta aactacggga
721 aagaacatca atataagctg accgtcactg cctatgactg tgggaagaaa agagccacag
781 aagatgtttt ggtgaagatc agcattaagc ccacctgcac ccctgggtgg caaggatgga
841 acaacaggat tgagtatgag ccgggcaccg gcgcgttggc cgtctttcca aatatccacc
901 tggagacatg tgacgagcca gtcgcctcag tacaggccac agtggagcta gaaaccagcc
961 acatagggaa aggctgcgac cgagacacct actcagagaa gtccctccac cggctctgtg
1021 gtgcggccgc gggcactgcc gagctgctgc catccccgag tggatccctc aactggacca
1081 tgggcctgcc caccgacaat ggccacgaca gcgaccaggt gtttgagttc aacggcaccc
1141 aggcagtgag gatcccggat ggcgtcgtgt cggtcagccc caaagagccg ttcaccatct
1201 cggtgtggat gagacatggg ccattcggca ggaagaagga gacaattctt tgcagttctg
1261 ataaaacaga tatgaatcgg caccactact ccctctatgt ccacgggtgc cggctgatct
1321 tcctcttccg tcaggatcct tctgaggaga agaaatacag acctgcagag ttccactgga
1381 agttgaatca ggtctgtgat gaggaatggc accactacgt cctcaatgta gaattcccga
1441 gtgtgactct ctatgtggat ggcacgtccc acgagccctt ctctgtgact gaggattacc
1501 cgctccatcc atccaagata gaaactcagc tcgtggtggg ggcttgctgg caaggtggcg
1561 acctgcacat gacccagttt ttccgaggca atctggctgg cttaactctc cgttccggga
1621 aactcgcgga taagaaggtg atcgactgtc tgtatacctg caaggagggg ctggacctgc
1681 aggtcctcga agacagtggc agaggcgtgc agatccaagc acaccccagc cagttggtat
1741 tgaccttgga gggagaagac ctcggggaat tggataaggc catgcagcac atctcgtacc
1801 tgaactcccg gcagttcccc acgcccggaa ttcgcagact caaaatcacc agcacaatca
1861 agtgttttaa cgaggccacc tgcatttcgg tccccccggt agatggctac gtgatggttt
1921 tacagcccga ggagcccaag atcagcctga gtggcgtcca ccattttgcc cgagcagctt
1981 ctgaatttga aagctcagaa ggggtgttcc ttttccctga gcttcgcatc atcagcacca
2041 tcacgagaga agtggagcct gaaggggacg gggctgagga ccccacagtt caagaatcac
2101 tggtgtccga ggagatcgtg cacgacctgg atacctgtga ggtcacggtg gagggagagg
2161 agctgaacca cgagcaggag agcctggagg tggacatggc ccgcctgcag cagaagggca
2221 ttgaagtgag cagctctgaa ctgggcatga ccttcacagg cgtggacacc atggccagct
2281 acgaggaggt tttgcacctg ctgcgctatc ggaactggca tgccaggtcc ttgcttgacc
2341 ggaagtttaa gctcatctgc tcagagctga atggccgcta catcagcaac gaatttaagg
2401 tggaggtgaa tgtaatccac acggccaacc ccatggaaca cgccaaccac atggctgccc
2461 agccacagtt cgtgcacccg gaacaccgct cctttgttga cctgtcaggc cacaacctgg
2521 ccaaccccca cccgttcgca gtcgtcccca gcactgcgac agttgtgatc gtggtgtgcg
2581 tcagcttcct ggtgttcatg attatcctgg gggtatttcg gatccgggcc gcacatcggc
2641 ggaccatgcg ggatcaggac accgggaagg agaacgagat ggactgggac gactctgccc
2701 tgaccatcac cgtcaacccc atggagacct atgaggacca gcacagcagt gaggaggagg
2761 aggaagagga agaggaagag gaaagcgagg acggcgaaga agaggatgac atcaccagcg
2821 ccgagtcgga gagcagcgag gaggaggagg gggagcaggg cgacccccag aacgcaaccc
2881 ggcagcagca gctggagtgg gatgactcca ccctcagcta ctgacccgtg cccccggcca
2941 cctcggtttc tgctttcgaa gactctgctg ccatccgttc tcccagtccc aagggtccac
3001 gatgtacaaa gtcatttcgg ccagtaggtg tgcagacccc tccccgccac gatcgtcgct
3061 gtgcttggtg tgtaggaccc taggctcccc gcccaccctc tgcctggtcg cgctcttcag
3121 tcccacgagg agctgacacg tcctctctgg ccgccatccg gctcgcacag gggcctccca
3181 gcgcctc
//