LOCUS AK304811 1051 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61579 complete cds, moderately similar to
Homo sapiens sphingomyelin phosphodiesterase 4, neutral membrane,
transcript variant 2, mRNA.
ACCESSION AK304811
VERSION AK304811.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1051)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1051
/clone="UTERU3015950"
/clone_lib="UTERU3"
/db_xref="H-InvDB:HIT000499435"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 259..882
/codon_start=1
/note="moderately similar to Homo sapiens sphingomyelin
phosphodiesterase 4, neutral membrane, transcript variant
2, mRNA"
/protein_id="BAG65561.1"
/transl_table=1
/translation="MAFPHLQQPSFLLELHTIFPWLVESIFGSLDGVLVGWNLRCLQG
RVNPVEYSIVMEFLDTGGPMMKLVYKLQAEDYKFDFPVSYLPGPVKASIQECILPDSP
LYHNKVQFTPTGGLGLNLALNPFEYYIFFFASSLITQKPLPVSLHVRTSDCAYFILVD
RYLSWFLPTEGSVPCHSPPAQGGPAPHRLPGHQPCPLLPMASTTLAS"
BASE COUNT 194 a 337 c 259 g 261 t
ORIGIN
1 actcctgcct cgccatttcc cctccctggc cggccggccg gccttcttcg ctttgcgcac
61 gtaccttttg aggtaacggc ccaaagaggt agaagcgctt ttcccgcccg gccgcggggc
121 gtggctctgc gcgcagcttg atgacgacgt tttggcgcgg tggcggaatg gcggcttcca
181 cctctgaagc gggcgacgct atgggtccca cagtggtttg ctaagaaggc cattttcaac
241 tctccattgg aggctgctat ggcgttccct cacctgcagc agcccagctt tctactggag
301 ctgcacacca tcttcccatg gctggtagag agcattttcg gcagcctaga cggtgtcctc
361 gttggctgga acctccgctg cttacagggg cgtgtgaatc ctgtggagta cagcatcgtg
421 atggaatttc tcgacactgg tggcccaatg atgaagttgg tttataagct tcaagctgaa
481 gactataagt tcgactttcc tgtctcctac ctgcctggtc ctgtgaaggc gtccatccag
541 gagtgcatcc tccctgacag tcctctgtac cacaacaagg tccagttcac ccctactggg
601 ggccttggtc tgaacctggc cctgaatcca ttcgagtatt acatattctt ctttgcctcg
661 agcctcatca ctcagaagcc actccctgtg tccctccacg tccgtacttc agactgtgcc
721 tatttcatcc tggtggacag gtacctgtca tggttcctgc ccaccgaagg cagtgtgccc
781 tgccactctc ctccagccca ggggggacca gcccctcacc gcctcccagg acaccaacca
841 tgccctttgc ttcctatggc ctccaccaca ctagcctcct gaagcgacac atctctcatc
901 agacgtctgt gaatgcagac cccgcctccc acgagatctg gaggtcagac actgctccag
961 gtttttgttg aaatgtggct tcatcactat tcgttggaga tgtatcaaaa aatgcagtcc
1021 cctcatgcca aggagtcgtt cacgcctact g
//