LOCUS AK304809 1562 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51204 complete cds, highly similar to Sorting
nexin-19.
ACCESSION AK304809
VERSION AK304809.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1562)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1562
/clone="UTERU3015865"
/clone_lib="UTERU3"
/db_xref="H-InvDB:HIT000499433"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 226..1533
/codon_start=1
/note="highly similar to Sorting nexin-19"
/protein_id="BAG65559.1"
/transl_table=1
/translation="MYETALDGENSSGLQQLAYHTVNRRYREFLNLQTRLEEKPDLRK
FIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALN
TDARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSEPQSPTEELSEAETESKPQTEG
KKASKSRLRFSSSKISPALSVTEAQDKILYCLQEGSVESETLSMSAMESFIEKQTKLL
EMQPTKAPEKDPEQPPKGRVDSCVSDAAVPAQDPSNSDPGTETELADTALDLLLLLLT
EQWKWLCTENMQKFLRLIFGTLVQRWLEVQVANLTSPQRWVQYLRLLQESIWPGGVLP
KFPRPVRTQEQKLAAEKQALQSLMGVLPDLVVEILGVNKCRLSWGLVLESLQQPLINR
HLIYCLGDIILEFLDLSASVEESAATTSASDTPGNSKRMGVSS"
BASE COUNT 398 a 409 c 414 g 341 t
ORIGIN
1 atccttcaca caggcccggc cgcggagcgc agtcgcccag gtttacggcg gcagagggcc
61 gaggctcccg gagaggaccg cgatgagtcc acttcaggtc ggggctgagt gtgggcgccc
121 ggttcccggc ggcgtgtgac ccagtcttcg ccggccgctg cccgctgcgt gtgattcagg
181 atgccctgtg tgccctagag agttcccagg ctctggaacc caaagatgta cgagacagcc
241 cttgacggtg aaaacagcag cggcctgcag cagctggcct accacactgt gaatcgtcgc
301 tatcgggagt tcttgaatct gcagacccgt ctggaggaga aaccagatct acgaaagttc
361 atcaaaaatg tgaagggtcc taaaaagctc tttccagatc ttccatttgg aaacatggac
421 agtgacagag tagaagcccg taagagcctc ctagaatcat tcctaaagca actctgtgcc
481 attccagaga tcgctaacag tgaggaggtg caggagttcc ttgctctgaa cacagatgct
541 cgtattgcct ttgtcaagaa accatttatg gtctctagaa tagacaagat ggtggtgagt
601 gccattgtgg acaccttgaa gacagcgttt cctcgctctg aaccccagag ccccacagag
661 gagctgagtg aggccgagac cgaaagcaag ccccagacag aaggcaagaa ggctagcaag
721 tccaggctga ggttctcatc cagtaaaatt tctccagcac taagtgtgac tgaagcacaa
781 gacaagattc tttattgtct ccaggaaggc agtgtggagt ctgagactct atccatgtct
841 gcgatggaat cttttattga aaaacagaca aagttactgg aaatgcagcc aacaaaagcc
901 ccagaaaaag atcctgaaca acctcccaaa ggacgtgtgg acagttgcgt gtcagatgca
961 gccgtgccag cccaagaccc cagcaacagc gatccaggaa cagagacaga gttagctgac
1021 acagccctgg atctgctcct cttgctacta acagaacagt ggaaatggct atgtaccgaa
1081 aacatgcaaa agtttcttcg tcttatcttt gggaccctag ttcaaaggtg gctagaggtg
1141 caggtagcta atttaacaag tccacagcgc tgggtgcagt acctccggct tcttcaggag
1201 tccatctggc ctggtggagt tttgcctaag tttccacggc ccgtaaggac ccaagagcag
1261 aaactggctg ctgagaaaca ggctttgcag agcctgatgg gagtcctccc agatctcgta
1321 gtagaaattc ttggggtgaa caaatgccgg ctgagctggg gtctagtcct ggagtcacta
1381 caacaacccc tcatcaacag gcatttgatt tactgccttg gggacatcat cctggaattc
1441 ttggatctca gtgcctctgt tgaggagtct gctgctacca cctctgcctc agatacccca
1501 ggcaactcta agaggatggg tgtctcctct tagctggtta ttcacgcctt cttcccaggt
1561 ca
//