LOCUS AK304761 4424 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57020 complete cds, highly similar to
Rho-guanine nucleotide exchange factor.
ACCESSION AK304761
VERSION AK304761.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4424)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4424
/clone="UTERU3009349"
/clone_lib="UTERU3"
/db_xref="H-InvDB:HIT000499385"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 72..4250
/codon_start=1
/note="highly similar to Rho-guanine nucleotide exchange
factor"
/protein_id="BAG65516.1"
/transl_table=1
/translation="MDSDSDSPFNYSWPSFPKMKIRRRTSKQDRSFDILKKSKPPSTL
LAAGRLSDMLNGGDEVYANCMVIDQVGDLDISYINIEGITATTSPESRGCTLWPQSSK
HTLPTETSPSVYPLSENVEGTAHTEAQQSFMSPSSSCASNLNLSFGWHGFEKEQSHLK
KRSSSLDALDADSEGEGHSEPSHICYTPGSQSSSRTGIPSGDELDSFETNTEPDFNIS
RAESLPLSSNLQSKESLLSGVRSRSYSCSSPKISLGKTRLVRELTVCSSSEEQRAYSL
SEPPRENRIQEEEWDKYIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKSKDAKDK
EKLNRHQFAPGTFSGVLQCLVCDKTLLGKESLQCSNCNANVHKGCKDAAPACTKKFQE
KYNKNKPQTILGNSSFRDIPQPGLSLHPSSSVPVGLPTGRRETVGQVHPLSRSVPGTT
LESFRRSATSLESESDHNSCRSRSHSDELLQSMGSSPSTESFIMEDVVDSSLWSDLSS
DAQEFEAESWSLVVDPSFCNRQEKDVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGM
KEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCAGSDRNFVIDRIGDILVQ
QFSEENASKMKKIYGEFCCHHKEAVNLFKELQQNKKFQNFIKLRNSNLLARRRGIPEC
ILLVTQRITKYPVLVERILQYTKERTEEHKDLRKALCLIKDMIATVDLKVNEYEKNQK
WLEILNKIENKTYTKLKNGHVFRKQALMSEERTLLYDGLVYWKTATGRFKDILALLLT
DVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIH
TNSKEERNNWMRRIQQAVESCPEEKGGRTSESDEDKRKAEARVAKIQQCQEILTNQDQ
QICAYLEEKLHIYAELGELSGFEDVHLEPHLLIKPDPGEPPQAASLLAAALKEAESLQ
VAVKASQMGAVSQSCEDSCGDSVLADTLSSHDVPGSPTASLVTGGREGRGCSDVDPGI
QGVVTDLAVSDAGEKVECRNFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHR
LVLQQQEGLSLGHSILRGGPLQDQKSRDADRQHEELANVHQLQHQLQQEQRRWLRRCE
QQQRAQATRESWLQERERECQSQEELLLRSRGELDLQLQEYQHSLERLREGQRLVERE
QARMRAQQSLLGHWKHGRQRSLPAVLLPGGPEVMELNRSESLCHENSFFINEALVQMS
FNTFNKLNPSVIHQDATYPTTQSHSDLVRTSEHQVDLKVDPSQPSNVSHKLWTAAGSG
HQILPFQESSKDSCKNDLDTSHTESPTPHDSNSHRPQLQAFITEAKLNLPTRTMTRQD
GETGDGAKENIVYL"
BASE COUNT 1295 a 998 c 1067 g 1064 t
ORIGIN
1 ctggctgggg acgccccgag ttcttcctga gtctctactg tttcatctgt tgatttcacc
61 aaaacaaaaa gatggattct gactccgact caccttttaa ctactcgtgg ccttcctttc
121 ccaaaatgaa gattcgaaga aggacgtcca aacaagatcg ctccttcgat atcctaaaaa
181 aatccaagcc gccctcgaca ttgcttgctg caggccggct ttcagacatg ctgaatggag
241 gtgatgaagt ctacgctaac tgtatggtga ttgatcaggt tggtgatttg gatatcagct
301 atattaatat agagggaatc actgccacta ccagccctga atccagaggt tgcactctgt
361 ggcctcagag cagcaaacac acccttccta cagaaaccag tcccagtgtg tacccactta
421 gtgaaaatgt cgaagggaca gcacacactg aagcccagca gtccttcatg tcaccatcaa
481 gttcgtgtgc ttccaacttg aatctttctt ttggttggca tggatttgaa aaggaacaaa
541 gtcatctaaa gaaaagaagt tctagccttg atgccttgga cgccgacagt gaaggggaag
601 ggcattctga gccatcccac atctgttaca ctccagggtc tcagagctcc tcaagaactg
661 ggattcctag tggggatgaa ttggactctt ttgagactaa cactgaaccg gattttaata
721 tctccagggc tgaatccctt cctctatcaa gtaatctaca gtcgaaggaa tcactgcttt
781 ctggagttcg ctcacgttct tattcttgct cgtcacccaa aatttcttta ggaaaaactc
841 gtttggtgcg tgaattaaca gtatgcagtt caagtgaaga gcaaagagct tacagcttat
901 cggagccacc aagagaaaac agaattcagg aagaagaatg ggataaatac atcatacctg
961 ccaaatcaga gtctgaaaaa tataaagtga gtcgaacttt cagtttcctc atgaatagga
1021 tgactagccc tcggaataaa tcaaagacaa aaagcaagga tgccaaagat aaagagaagc
1081 tgaatcgaca tcagtttgcc ccaggaacat tctctggggt tctgcagtgt ttggtttgtg
1141 ataaaacact cctggggaaa gagtcactgc agtgttctaa ctgtaatgca aatgtgcaca
1201 aaggttgtaa agatgctgcg cctgcatgca ccaagaaatt ccaagagaaa tataacaaga
1261 acaaaccaca gaccatcctt ggaaattctt catttagaga catcccacag cctggtctct
1321 ccttgcaccc ttcttcctcc gtgcctgttg gattgccgac tggaaggagg gagactgtgg
1381 gacaggtcca tccattgtcc agaagtgttc caggcaccac cttggaaagc ttcaggaggt
1441 cagccacatc cttggagtct gagagtgacc ataacagctg cagaagcagg tctcattctg
1501 atgagctgct acagtccatg ggctcttctc cctctacaga gtctttcata atggaagatg
1561 ttgtggattc ttctctgtgg agtgacctca gcagtgatgc ccaggagttt gaagcagaat
1621 cttggagtct tgtggtggat ccctcatttt gtaataggca ggagaaggat gtcatcaaaa
1681 gacaggatgt catttttgag ctaatgcaaa cagagatgca tcacatccag accctgttca
1741 tcatgtctga gatcttcagg aaaggcatga aagaggagct gcagctggac cacagcaccg
1801 tggataaaat tttcccctgt ttagatgagt tgcttgaaat ccacaggcat ttcttctaca
1861 gtatgaagga acgaaggcag gaatcctgtg ctggcagcga caggaatttt gtgatcgacc
1921 gaattggaga tattttggta caacagtttt cagaagaaaa tgcaagtaaa atgaagaaaa
1981 tatatggaga attctgttgc catcataaag aagctgttaa cctctttaaa gaactccagc
2041 agaataaaaa gtttcagaat tttattaagc tccgaaatag taatcttttg gctcgacgcc
2101 gaggaattcc agaatgcatt ctgttggtca ctcagcgtat tacaaaatac cctgtcttgg
2161 tggaaaggat attgcagtac acaaaggaaa gaactgagga acataaagac ttacgcaaag
2221 cgctttgctt aattaaagac atgattgcaa cagtggattt aaaagtcaat gaatatgaga
2281 aaaaccaaaa atggcttgag atcctaaata agattgaaaa caaaacatac acgaagctca
2341 aaaatggaca tgtgtttagg aagcaggcac tgatgagtga agaaaggact ctgttatatg
2401 atggccttgt ttactggaaa actgccacag gtcgtttcaa agatatccta gctctacttc
2461 taactgatgt gctgctcttt ttacaagaaa aagaccagaa atacatcttt gcagccgttg
2521 atcagaagcc atcagttatt tcccttcaaa agcttattgc tagagaagtt gctaatgagg
2581 agagaggaat gtttctgatc agtgcttcat ctgctggtcc tgagatgtat gaaattcaca
2641 ccaattccaa ggaggaacgc aataactgga tgagacggat ccagcaggct gtagaaagtt
2701 gtcctgaaga aaaaggggga aggacaagtg aatctgatga agacaagagg aaagctgaag
2761 ccagagtggc caaaattcag caatgtcaag aaatactcac taaccaagac caacaaattt
2821 gtgcgtattt ggaggagaag ctgcatatct atgctgaact tggagaactg agcggatttg
2881 aggacgtcca tctagagccc cacctcctta ttaaacctga cccaggcgag cctccccagg
2941 cagcctcatt actggcagca gcactgaaag aagctgagag cctacaagtt gcagtgaagg
3001 cctcacagat gggcgccgtg agtcaatcat gtgaggacag ttgtggagac tctgtcttgg
3061 cggacacact cagttctcat gatgtaccag gatcaccgac tgcctcatta gtcacaggag
3121 ggagagaagg aagaggctgt tcggatgtgg atcccgggat ccagggtgtg gtaaccgact
3181 tggccgtctc tgatgcaggg gagaaggtgg aatgtagaaa ttttccaggt tcttcacaat
3241 cagagattat acaagccata cagaatttaa cccgtctctt atacagcctt caggccgcct
3301 tgaccattca ggacagccac attgagatcc acaggctggt tctccagcag caggagggcc
3361 tgtctctcgg ccactctatc ctccgaggcg gccccttgca ggaccagaag tctcgcgacg
3421 cggacaggca gcatgaggag ctggccaatg tgcaccagct tcagcaccag ctccagcagg
3481 agcagcggcg ctggctgcgc aggtgtgagc agcagcagcg ggcgcaggcg accagggaga
3541 gctggctgca ggagcgggag cgggagtgcc agtcgcagga ggagctgctg ctgcggagcc
3601 ggggcgagct ggacctccag ctccaggagt accagcacag cctggagcgg ctgagggagg
3661 gccagcgcct ggtggagagg gagcaggcga ggatgcgggc ccagcagagc ctgctgggcc
3721 actggaagca cggccggcag aggagcctgc ccgcggtgct ccttccgggt ggccccgagg
3781 taatggaact taatcgatct gagagtttat gtcatgaaaa ctcattcttc atcaatgaag
3841 ctttagtaca aatgtcattt aacactttca acaaactgaa tccatcagtt atccatcagg
3901 atgccactta ccctacaact caatctcatt ctgacttggt gaggactagt gaacatcaag
3961 tagacctcaa ggtggaccct tctcagcctt cgaatgtcag tcacaaactg tggacagccg
4021 ctggttccgg ccatcagata cttcctttcc aagaaagcag caaggattct tgtaaaaatg
4081 atttggacac ctcccacact gagtccccaa ccccccatga ctcaaattca caccgccctc
4141 aactgcaggc gtttataaca gaagcaaagc taaatctacc gacaaggaca atgaccagac
4201 aagatgggga aactggagat ggagccaaag aaaatattgt ttacctctaa ttgtgttgtc
4261 atttttccaa acaaaacaaa acactggcac ttttgggaga aactttttgt ctccattcct
4321 tatgtatgtg tgattgtctg tgtccaaatt gctttaagaa taatatttaa tatttcctgg
4381 aagctcattt ttttggcatg agtctaatta aattattgaa agcc
//