LOCUS AK304754 3621 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51203 complete cds, highly similar to
Thrombospondin-1 precursor.
ACCESSION AK304754
VERSION AK304754.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3621)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3621
/clone="UTERU3008715"
/clone_lib="UTERU3"
/db_xref="H-InvDB:HIT000499378"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 181..3438
/codon_start=1
/note="highly similar to Thrombospondin-1 precursor"
/protein_id="BAG65509.1"
/transl_table=1
/translation="MGLSWGLGVLFLMHVCGTLLALERKDHSGQVFSVVSNGKAGTLD
LSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELDVPIQSVF
TRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTSVLLTLDNN
VVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRKVTE
ENKELANELRRPPLCYHNGVQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCSNA
TVPDGECCPRCWPSDSADDGWSPWSEWTSCSTSCGNGIQQRGRSCDSLNNRCEGSSVQ
TRTCHIQECDKIFKQDGGWSHWSPWSSCSVTRGDGVITRIRLCNSPSPQMNGKPCEGE
ARETKACKKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDV
TENQICNKQDCPIDGCLSNPCFAGVKCTSYPDGSWKCGACPPGYSGNGIQCTDVDECK
EVPDACFNHNGEHRCENTDPGYNCLPCPPRFTGSQPFGQGVEHATANKQVCKPRNPCT
DGTHDCNKNAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANA
TYHCKKDNCPNLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDR
DDVGDRCDNCPYNHNPDQADTDNNGEGDACAADIDGDGILNERDDCQYVYNVDQRDTD
MDGVGDQCDNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQA
DHDKDGKGDACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPD
IDDICPENVDISETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVG
YDEFNAVDFSGTFFINTERDDDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQG
YSGLSVKVVNSTTGPGEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHR
PKTGFIRVVMYEGKKIMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP"
BASE COUNT 903 a 1006 c 968 g 744 t
ORIGIN
1 cagccgctgc gcccgagctg gcctgcgagt tcagggctcc tgtcgctctc caggagcaac
61 ctctactccg gacgcacagg cattccccgc gcccctccag ccctcgccgc cctcgccacc
121 gctcccggcc gccgcgctcc ggtacacaca ggatccctgc tgggcaccaa cagctccacc
181 atggggctgt cctggggact aggcgtcctg ttcctgatgc atgtgtgtgg cacgctgctg
241 gccctggagc ggaaagacca ctctggccag gtcttcagcg tggtgtccaa tggcaaggcg
301 ggcaccctgg acctcagcct gaccgtccaa ggaaagcagc acgtggtgtc tgtggaagaa
361 gctctcctgg caaccggcca gtggaagagc atcaccctgt ttgtgcagga agacagggcc
421 cagctgtaca tcgactgtga aaagatggag aatgctgagt tggacgtccc catccaaagc
481 gtcttcacca gagacctggc cagcatcgcc agactccgca tcgcaaaggg gggcgtcaat
541 gacaatttcc agggggtgct gcagaatgtg aggtttgtct ttggaaccac accagaagac
601 atcctcagga acaaaggctg ctccagctct accagtgtcc tcctcaccct tgacaacaac
661 gtggtgaatg gttccagccc tgccatccgc actaactaca ttggccacaa gacaaaggac
721 ttgcaagcca tctgcggcat ctcctgtgat gagctgtcca gcatggtcct ggaactcagg
781 ggcctgcgca ccattgtgac cacgctgcag gacagcatcc gcaaagtgac tgaagagaac
841 aaagagttgg ccaatgagct gaggcggcct cccctatgct atcacaacgg agttcagtac
901 agaaataacg aggaatggac tgttgatagc tgcactgagt gtcactgtca gaactcagtt
961 accatctgca aaaaggtgtc ctgccccatc atgccctgct ccaatgccac agttcctgat
1021 ggagaatgct gtcctcgctg ttggcccagc gactctgcgg acgatggctg gtctccatgg
1081 tccgagtgga cctcctgttc tacgagctgt ggcaatggaa ttcagcagcg cggccgctcc
1141 tgcgatagcc tcaacaaccg atgtgagggc tcctcggtcc agacacggac ctgccacatt
1201 caggagtgtg acaagatatt taaacaggat ggtggctgga gccactggtc cccgtggtca
1261 tcttgttctg tgacacgtgg tgatggtgtg atcacaagga tccggctctg caactctccc
1321 agcccccaga tgaacgggaa accctgtgaa ggcgaagcgc gggagaccaa agcctgcaag
1381 aaagacgcct gccccatcaa tggaggctgg ggtccttggt caccatggga catctgttct
1441 gtcacctgtg gaggaggggt acagaaacgt agtcgtctct gcaacaaccc cacaccccag
1501 tttggaggca aggactgcgt tggtgatgta acagaaaacc agatctgcaa caagcaggac
1561 tgtccaattg atggatgcct gtccaatccc tgctttgccg gcgtgaagtg tactagctac
1621 cctgatggca gctggaaatg tggtgcttgt ccccctggtt acagtggaaa tggcatccag
1681 tgcacagatg ttgatgagtg caaagaagtg cctgatgcct gcttcaacca caatggagag
1741 caccggtgtg agaacacgga ccccggctac aactgcctgc cctgcccccc acgcttcacc
1801 ggctcacagc ccttcggcca gggtgtcgaa catgccacgg ccaacaaaca ggtgtgcaag
1861 ccccgtaacc cctgcacgga tgggacccac gactgcaaca agaacgccaa gtgcaactac
1921 ctgggccact atagcgaccc catgtaccgc tgcgagtgca agcctggcta cgctggcaat
1981 ggcatcatct gcggggagga cacagacctg gatggctggc ccaatgagaa cctggtgtgc
2041 gtggccaatg cgacttacca ctgcaaaaag gataattgcc ccaaccttcc caactcaggg
2101 caggaagact atgacaagga tggaattggt gatgcctgtg atgatgacga tgacaatgat
2161 aaaattccag atgacaggga caactgtcca ttccattaca acccagctca gtatgactat
2221 gacagagatg atgtgggaga ccgctgtgac aactgtccct acaaccacaa cccagatcag
2281 gcagacacag acaacaatgg ggaaggagac gcctgtgctg cagacattga tggagacggt
2341 atcctcaatg aacgggacga ctgccagtac gtctacaatg tggaccagag agacactgat
2401 atggatgggg ttggagatca gtgtgacaat tgccccttgg aacacaatcc ggatcagctg
2461 gactctgact cagaccgcat tggagatacc tgtgacaaca atcaggatat tgatgaagat
2521 ggccaccaga acaatctgga caactgtccc tatgtgccca atgccaacca ggctgaccat
2581 gacaaagatg gcaagggaga tgcctgtgac cacgatgatg acaacgatgg cattcctgat
2641 gacaaggaca actgcagact cgtgcccaat cccgaccaga aggactctga cggcgatggt
2701 cgaggtgatg cctgcaaaga tgattttgac catgacagtg tgccagacat cgatgacatc
2761 tgtcctgaga atgttgacat cagtgagacc gatttccgcc gattccagat gattcctctg
2821 gaccccaaag ggacatccca aaatgaccct aactgggttg tacgccatca gggtaaagaa
2881 ctcgtccaga ctgtcaactg tgatcctgga ctcgctgtag gttatgatga gtttaatgct
2941 gtggacttca gtggcacctt cttcatcaac accgaaaggg acgatgacta tgctggattt
3001 gtctttggct accagtccag cagccgcttt tatgttgtga tgtggaagca agtcacccag
3061 tcctactggg acaccaaccc cacgagggct cagggatact cgggcctttc tgtgaaagtt
3121 gtaaactcca ccacagggcc tggcgagcac ctgcggaacg ccctgtggca cacaggaaac
3181 acccctggcc aggtgcgcac cctgtggcat gaccctcgtc acataggctg gaaagatttc
3241 accgcctaca gatggcgtct cagccacagg ccaaagacgg gtttcattag agtggtgatg
3301 tatgaaggga agaaaatcat ggctgactca ggacccatct atgataaaac ctatgctggt
3361 ggtagactag ggttgtttgt cttctctcaa gaaatggtgt tcttctctga cctgaaatac
3421 gaatgtagag atccctaatc atcaaattgt tgattgaaag actgatcata aaccaatgct
3481 ggtattgcac cttctggaac tatgggcttg agaaaacccc caggatcact tctccttggc
3541 ttccttcttt tctgtgcttg catcagtgtg gactcctaga acgtgcgacc tgcctcaaga
3601 aaatgcagtt ttcaaaaaca g
//