LOCUS AK304747 1486 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58481 complete cds, highly similar to Homo
sapiens hypoxia inducible factor 3, alpha subunit (HIF3A),
transcript variant 3, mRNA.
ACCESSION AK304747
VERSION AK304747.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1486)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1486
/clone="UTERU3008284"
/clone_lib="UTERU3"
/db_xref="H-InvDB:HIT000499371"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 264..1283
/codon_start=1
/note="highly similar to Homo sapiens hypoxia inducible
factor 3, alpha subunit (HIF3A), transcript variant 3,
mRNA"
/protein_id="BAG65505.1"
/transl_table=1
/translation="MRLTISYLRMHRLCAAGEWNQVGAGGEPLDACYLKALEGFVMVL
TAEGDMAYLSENVSKHLGLSQLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEA
PTERCFSLRMKSTLTSRGRTLNLKAATWKVLNCSGHMRAYKPPAQTSPAGSPDSEPPL
QCLVLICETIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSA
YEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSE
SIVCVHFLIRWKRPEWCCPWSKRSNTLADPFSGAPPLRRTPLTLGTALTPLAPGSLPS
CTRLP"
BASE COUNT 280 a 528 c 426 g 252 t
ORIGIN
1 cctgtggagt catctcaccg ccgtgcgcac ccactcgtaa ctcgcacccg ggtcctggct
61 gcaccgcatc ccctcctgca ccccctggat ggcccttcag ccaacggggg cctgggcgat
121 ggtcgaccac ggagctgcgc aaggaaaagt cccgggatgc ggcccgcagc cggcgcagcc
181 aggagaccga ggtgctgtac cagctggctc acacgctgcc cttcgcccgc ggcgtcagcg
241 cccacctgga caaggcctct atcatgcgcc tcaccatcag ctacctgcgc atgcaccgcc
301 tctgcgccgc aggggagtgg aaccaggtgg gagcaggggg agaaccactg gatgcctgct
361 acctgaaggc cctggagggc ttcgtcatgg tgctcaccgc cgagggagac atggcttacc
421 tgtcggagaa tgtcagcaaa cacctgggcc tcagtcagct ggagctcatt ggacacagca
481 tctttgattt catccacccc tgtgaccaag aggagcttca ggacgccctg accccccagc
541 agaccctgtc caggaggaag gtggaggccc ccacggagcg gtgcttctcc ttgcgcatga
601 agagtacgct caccagccgc gggcgcaccc tcaacctcaa ggcggccacc tggaaggtgc
661 tgaactgctc tggacatatg agggcctaca agccacctgc gcagacttct ccagctggga
721 gccctgactc agagcccccg ctgcagtgcc tggtgctcat ctgcgaaacc atcccccacc
781 caggcagcct ggagccccca ctgggccgag gggccttcct cagccgccac agcctggaca
841 tgaagttcac ctactgtgac gacaggattg cagaagtggc tggctatagt cccgatgacc
901 tgatcggctg ttccgcctac gagtacatcc acgcgctgga ctccgacgcg gtcagcaaga
961 gcatccacac cttgctgagc aagggccagg cagtaacagg gcagtatcgc ttcctggccc
1021 ggagtggtgg ctacctgtgg acccagaccc aggccacagt ggtgtcaggg ggacggggcc
1081 cccagtcgga gagtatcgtc tgtgtccatt ttttaatcag gtggaagaga ccggagtggt
1141 gctgtccctg gagcaaacgg agcaacactc tcgcagaccc attcagcggg gcgccccctc
1201 tcagaaggac acccctaacc ctggggacag ccttgacacc cctggccccc ggatccttgc
1261 cttcctgcac ccgccttccc tgagcgaggc tgccctggcc gctgaccccc gccgtttctg
1321 cagccctgac ctccgtcgcc tcctgggacc catcctggat ggggcttcag tagcagccac
1381 tcccagcacc ccgctggcca cacggcaccc ccaaagtcct ctttcggctg atctcccaga
1441 tgaactacct gtgggcaccg agaatgtgca cagactcttc acctcc
//