LOCUS AK304735 4055 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53432 complete cds, highly similar to DNA
mismatch repair protein MSH6.
ACCESSION AK304735
VERSION AK304735.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4055)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4055
/clone="UTERU3006191"
/clone_lib="UTERU3"
/db_xref="H-InvDB:HIT000499359"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 794..3970
/codon_start=1
/note="highly similar to DNA mismatch repair protein MSH6"
/protein_id="BAG65496.1"
/transl_table=1
/translation="MVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNS
ESQAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLN
SCTPGMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFP
EIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKG
TQTYSVLEGDPSENYSKYLLSLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRH
CSRFRTLVAHYPPVQVLFEKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRT
LLEEEYFREKLSDGIGVMLPQVLKGMTSESDSIGLTPGEKSELALSALGGCVFYLKKC
LIDQELLSMANFEEYIPLDSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNG
STEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLDAIEDLMVVPDKISEVVE
LLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVV
CKIIGIMEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGL
ITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPEN
FTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDK
NYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILLPEDTPPFLELKGSRHPCIT
KTFFGDDFIPNDILIGCEEEEQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGC
YVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDELG
RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENE
CEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRL
FREVCLASERSTVDAEAVHKLLTLIKEL"
BASE COUNT 1214 a 749 c 1021 g 1071 t
ORIGIN
1 gagtccggtg gtgtggggtg cgaaaggagg ttcctcggcc ggcgcggaga tagtgagttg
61 gggctccagt agtcgatcga ggtagacact tagaggtagt taagagccgc ggtcgccgag
121 acgccttggg gacggtgggc cttcggccta gttgtgactt ctcaccagga gatttggttt
181 gggccaagat ggagggttac ccctggtggc cttgtctggt ttacaaccac ccctttgatg
241 gaacattcat ccgcgagaaa gggaaatcag tccgtgttca tgtacagttt tttgatgaca
301 gcccaacaag gggctgggtt agcaaaaggc ttttaaagcc atatacaggt tcaaaatcaa
361 aggaagccca gaagggaggt catttttaca gtgcaaagcc tgaaatactg agagcaatgc
421 aacgtgcaga tgaagcctta aataaagaca agattaagag gcttgaattg gcagtttgtg
481 atgagccctc agagccagaa gaggaagaag agatggaggc acaacttacg taacagataa
541 gagtgaagaa gataatgaaa ttgagagtga agaggaagta cagcctaaga cacaaggatc
601 taggcgaagt agccgccaaa taaaaaaacg aagggtcata tcagattctg agagtgacat
661 tggtggctct gatgtggaat ttaagccaga cactaaggag gaaggaagca gtgatgaaat
721 aagcagtgga gtgggggata gtgagagtga aggcctgaac agccctgtca aagttgctcg
781 aaagcggaag agaatggtga ctggaaatgg ctctcttaaa aggaaaagct ctaggaagga
841 aacgccctca gccaccaaac aagcaactag catttcatca gaaaccaaga atactttgag
901 agctttctct gcccctcaaa attctgaatc ccaagcccac gttagtggag gtggtgatga
961 cagtagtcgc cctactgttt ggtatcatga aactttagaa tggcttaagg aggaaaagag
1021 aagagatgag cacaggagga ggcctgatca ccccgatttt gatgcatcta cactctatgt
1081 gcctgaggat ttcctcaatt cttgtactcc tgggatgagg aagtggtggc agattaagtc
1141 tcagaacttt gatcttgtca tctgttacaa ggtggggaaa ttttatgagc tgtaccacat
1201 ggatgctctt attggagtca gtgaactggg gctggtattc atgaaaggca actgggccca
1261 ttctggcttt cctgaaattg catttggccg ttattcagat tccctggtgc agaagggcta
1321 taaagtagca cgagtggaac agactgagac tccagaaatg atggaggcac gatgtagaaa
1381 gatggcacat atatccaagt atgatagagt ggtgaggagg gagatctgta ggatcattac
1441 caagggtaca cagacttaca gtgtgctgga aggtgatccc tctgagaact acagtaagta
1501 tcttcttagc ctcaaagaaa aagaggaaga ttcttctggc catactcgtg catatggtgt
1561 gtgctttgtt gatacttcac tgggaaagtt tttcataggt cagttttcag atgatcgcca
1621 ttgctcgaga tttaggactc tagtggcaca ctatccccca gtacaagttt tatttgaaaa
1681 aggaaatctc tcaaaggaaa ctaaaacaat tctaaagagt tcattgtcct gttctcttca
1741 ggaaggtctg atacccggct cccagttttg ggatgcatcc aaaactttga gaactctcct
1801 tgaggaagaa tattttaggg aaaagctaag tgatggcatt ggggtgatgt taccccaggt
1861 gcttaaaggt atgacttcag agtctgattc cattgggttg acaccaggag agaaaagtga
1921 attggccctc tctgctctag gtggttgtgt cttctacctc aaaaaatgcc ttattgatca
1981 ggagctttta tcaatggcta attttgaaga atatattccc ttggattctg acacagtcag
2041 cactacaaga tctggtgcta tcttcaccaa agcctatcaa cgaatggtgc tagatgcagt
2101 gacattaaac aacttggaga tttttctgaa tggaacaaat ggttctactg aaggaaccct
2161 actagagagg gttgatactt gccatactcc ttttggtaag cggctcctaa agcaatggct
2221 ttgtgcccca ctctgtaacc attatgctat taatgatcgt ctagatgcca tagaagacct
2281 catggttgtg cctgacaaaa tctccgaagt tgtagagctt ctaaagaagc ttccagatct
2341 tgagaggcta ctcagtaaaa ttcataatgt tgggtctccc ctgaagagtc agaaccaccc
2401 agacagcagg gctataatgt atgaagaaac tacatacagc aagaagaaga ttattgattt
2461 tctttctgct ctggaaggat tcaaagtagt gtgtaaaatt atagggatca tggaagaagt
2521 tgctgatggt tttaagtcta aaatccttaa gcaggtcatc tctctgcaga caaaaaatcc
2581 tgaaggtcgt tttcctgatt tgactgtaga attgaaccga tgggatacag cctttgacca
2641 tgaaaaggct cgaaagactg gacttattac tcccaaagca ggctttgact ctgattatga
2701 ccaagctctt gctgacataa gagaaaatga acagagcctc ctggaatacc tagagaaaca
2761 gcgcaacaga attggctgta ggaccatagt ctattggggg attggtagga accgttacca
2821 gctggaaatt cctgagaatt tcaccactcg caatttgcca gaagaatacg agttgaaatc
2881 taccaagaag ggctgtaaac gatactggac caaaactatt gaaaagaagt tggctaatct
2941 cataaatgct gaagaacgga gggatgtatc attgaaggac tgcatgcggc gactgttcta
3001 taactttgat aaaaattaca aggactggca gtctgctgta gagtgtatcg cagtgttgga
3061 tgttttactg tgcctggcta actatagtcg agggggtgat ggtcctatgt gtcgcccagt
3121 aattctgttg ccggaagata cccccccctt cttagagctt aaaggatcac gccatccttg
3181 cattacgaag actttttttg gagatgattt tattcctaat gacattctaa taggctgtga
3241 ggaagaggag caggaaaatg gcaaagccta ttgtgtgctt gttactggac caaatatggg
3301 gggcaagtct acgcttatga gacaggctgg cttattagct gtaatggccc agatgggttg
3361 ttacgtccct gctgaagtgt gcaggctcac accaattgat agagtgttta ctagacttgg
3421 tgcctcagac agaataatgt caggtgaaag tacatttttt gttgaattaa gtgaaactgc
3481 cagcatactc atgcatgcaa cagcacattc tctggtgctt gtggatgaat taggaagagg
3541 tactgcgaca tttgatggga cggcaatagc aaatgcagtt gttaaagaac ttgctgagac
3601 tataaaatgt cgtacattat tttcaactca ctaccattca ttagtagaag attattctca
3661 aaatgttgct gtgcgcctag gacatatggc atgcatggta gaaaatgaat gtgaagaccc
3721 cagccaggag actattacgt tcctctataa attcattaag ggagcttgtc ctaaaagcta
3781 tggctttaat gcagcaaggc ttgctaatct cccagaggaa gttattcaaa agggacatag
3841 aaaagcaaga gaatttgaga agatgaatca gtcactacga ttatttcggg aagtttgcct
3901 ggctagtgaa aggtcaactg tagatgctga agctgtccat aaattgctga ctttgattaa
3961 ggaattatag actgactaca ttggaagctt tgagttgact tctgacaaag gtggtaaatt
4021 cagacaacat tatgatctaa taaactttat ttttt
//