LOCUS AK304689 2349 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60399 complete cds, highly similar to
ATP-dependent RNA helicase DDX3X (EC 3.6.1.-).
ACCESSION AK304689
VERSION AK304689.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2349)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2349
/clone="UTERU3000057"
/clone_lib="UTERU3"
/db_xref="H-InvDB:HIT000499313"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 92..2032
/codon_start=1
/note="highly similar to ATP-dependent RNA helicase DDX3X
(EC 3.6.1.-)"
/protein_id="BAG65460.1"
/transl_table=1
/translation="MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASSFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGK
FERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCP
PHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF
LLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYR
SRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEAD
RMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRV
GSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGY
ACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEE
YVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKG
SSRGRSKSSRFSGGFGARDYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYG
GFYNSDGYGGNYNSQGVDWWGN"
BASE COUNT 663 a 457 c 624 g 605 t
ORIGIN
1 agagccgcag ttctcccgtg agagggcctt cgcggtggaa caaacactcg cttagcagcg
61 gaagactccg agttctcggt actcttcagg gatgagtcat gtggcagtgg aaaatgcgct
121 cgggctggac cagcagtttg ctggcctaga cctgaactct tcagataatc agagtggagg
181 aagtacagcc agcagtttct acgataaaga cagttcaggg tggagttcta gcaaagataa
241 ggatgcgtat agcagttttg gatctcgtag tgattcaaga gggaagtcta gcttcttcag
301 tgatcgtgga agtggatcaa ggggaaggtt tgatgatcgt ggacggagtg attacgatgg
361 cattggcagc cgtggtgaca gaagtggctt tggcaaattt gaacgtggtg gaaacagtcg
421 ctggtgtgac aaatcagatg aagatgattg gtcaaaacca ctcccaccaa gtgaacgctt
481 ggaacaggaa ctcttttctg gaggcaacac tgggattaat tttgagaaat acgatgacat
541 tccagttgag gcaacaggca acaactgtcc tccacatatt gaaagtttca gtgatgttga
601 gatgggagaa attatcatgg gaaacattga gcttactcgt tatactcgcc caactccagt
661 gcaaaagcat gctattccta ttatcaaaga gaaaagagac ttgatggctt gtgcccaaac
721 agggtctgga aaaactgcag catttctgtt gcccatcttg agtcagattt attcagatgg
781 tccaggcgag gctttgaggg ccatgaagga aaatggaagg tatgggcgcc gcaaacaata
841 cccaatctcc ttggtattag caccaacgag agagttggca gtacagatct acgaggaagc
901 cagaaaattt tcataccgat ctagagttcg tccttgcgtg gtttatggtg gtgccgatat
961 tggtcagcag attcgagact tggaacgtgg atgccatttg ttagtagcca ctccaggacg
1021 tctagtggat atgatggaaa gaggaaagat tggattagac ttttgcaaat acttggtgtt
1081 agatgaagct gatcggatgt tggatatggg gtttgagcct cagattcgta gaatagtcga
1141 acaagatact atgcctccaa agggtgtccg ccacactatg atgtttagtg ctacttttcc
1201 taaggaaata cagatgctgg ctcgtgattt cttagatgaa tatatcttct tggctgtagg
1261 aagagttggc tctacctctg aaaacatcac acagaaagta gtttgggtgg aagaatcaga
1321 caaacggtca tttctgcttg acctcctaaa tgcaacaggc aaggattcac tgaccttagt
1381 gtttgtggag accaaaaagg gtgcagattc tctggaggat ttcttatacc atgaaggata
1441 cgcatgtacc agcatccatg gagaccgttc tcagagggat agagaagagg cccttcacca
1501 gttccgctca ggaaaaagcc caattttagt ggctacagca gtagcagcaa gaggactgga
1561 catttcaaat gtgaaacatg ttatcaattt tgacttgcca agtgatattg aagaatatgt
1621 acatcgtatt ggtcgtacgg gacgtgtagg aaaccttggc ctggcaacct cattctttaa
1681 cgagaggaac ataaatatta ctaaggattt gttggatctt cttgttgaag ctaaacaaga
1741 agtgccgtct tggttagaaa acatggctta tgaacaccac tacaagggta gcagtcgtgg
1801 acgttctaag agtagcagat ttagtggagg gtttggtgcc agagactacc gacaaagtag
1861 cggtgccagc agttccagct tcagcagcag ccgcgcaagc agcagccgca gtggcggagg
1921 tggccacggt agcagcagag gatttggtgg aggtggctat ggaggctttt acaacagtga
1981 tggatatgga ggaaattata actcccaggg ggttgactgg tggggtaact gagcctgctt
2041 tgcagtaggt caccctgcca aacaagctaa tatggaaacc acatgtaact tagccagact
2101 ataccttgtg tagcctcaag aactcgcagt acattaccag ctgtgattct ccactgaaat
2161 ttttttttta agggagctca aggtcacaag aagaaatgaa aggaacaatc agcagccctg
2221 ttcagaaggt ggtttgaaga cttcattgct gtagtttgga ttaactcccc tcccgcctac
2281 ccccatccca aactgcattt ataattttgt gactgaggat catttgtttg ttaatgtact
2341 gtgccttta
//