LOCUS AK304496 3018 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51193 complete cds, highly similar to DNA
mismatch repair protein Msh2.
ACCESSION AK304496
VERSION AK304496.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3018)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3018
/clone="UTERU2001843"
/clone_lib="UTERU2"
/db_xref="H-InvDB:HIT000499120"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 140..2746
/codon_start=1
/note="highly similar to DNA mismatch repair protein Msh2"
/protein_id="BAG65304.1"
/transl_table=1
/translation="MGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNK
ASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDS
IQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITE
RKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDS
NFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLV
NQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAAN
LQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL
DMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSS
AQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQ
DAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRI
ILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQ
IGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIID
ELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALT
TEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYD
IMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEVIAKNNSF
VNEIISRIKVTT"
BASE COUNT 970 a 510 c 683 g 855 t
ORIGIN
1 aagctgactg ggtgtggtcg ccgtggccgg acgccgctcg ggggacgtgg gaggggaggc
61 gggaaacagc ttagtgggtg tggggtcgcg cattttcttc aaccaggagg tgttcaagac
121 ccagggggtg atcaagtaca tggggccggc aggagcaaag aatctgcaga gtgttgtgct
181 tagtaaaatg aattttgaat cttttgtaaa agatcttctt ctggttcgtc agtatagagt
241 tgaagtttat aagaatagag ctggaaataa ggcatccaag gagaatgatt ggtatttggc
301 atataaggct tctcctggca atctctctca gtttgaagac attctctttg gtaacaatga
361 tatgtcagct tccattggtg ttgtgggtgt taaaatgtcc gcagttgatg gccagagaca
421 ggttggagtt gggtatgtgg attccataca gaggaaacta ggactgtgtg aattccctga
481 taatgatcag ttctccaatc ttgaggctct cctcatccag attggaccaa aggaatgtgt
541 tttacccgga ggagagactg ctggagacat ggggaaactg agacagataa ttcaaagagg
601 aggaattctg atcacagaaa gaaaaaaagc tgacttttcc acaaaagaca tttatcagga
661 cctcaaccgg ttgttgaaag gcaaaaaggg agagcagatg aatagtgctg tattgccaga
721 aatggagaat caggttgcag tttcatcact gtctgcggta atcaagtttt tagaactctt
781 atcagatgat tccaactttg gacagtttga actgactact tttgacttca gccagtatat
841 gaaattggat attgcagcag tcagagccct taaccttttt cagggttctg ttgaagatac
901 cactggctct cagtctctgg ctgccttgct gaataagtgt aaaacccctc aaggacaaag
961 acttgttaac cagtggatta agcagcctct catggataag aacagaatag aggagagatt
1021 gaatttagtg gaagcttttg tagaagatgc agaattgagg cagactttac aagaagattt
1081 acttcgtcga ttcccagatc ttaaccgact tgccaagaag tttcaaagac aagcagcaaa
1141 cttacaagat tgttaccgac tctatcaggg tataaatcaa ctacctaatg ttatacaggc
1201 tctggaaaaa catgaaggaa aacaccagaa attattgttg gcagtttttg tgactcctct
1261 tactgatctt cgttctgact tctccaagtt tcaggaaatg atagaaacaa ctttagatat
1321 ggatcaggtg gaaaaccatg aattccttgt aaaaccttca tttgatccta atctcagtga
1381 attaagagaa ataatgaatg acttggaaaa gaagatgcag tcaacattaa taagtgcagc
1441 cagagatctt ggcttggacc ctggcaaaca gattaaactg gattccagtg cacagtttgg
1501 atattacttt cgtgtaacct gtaaggaaga aaaagtcctt cgtaacaata aaaactttag
1561 tactgtagat atccagaaga atggtgttaa atttaccaac agcaaattga cttctttaaa
1621 tgaagagtat accaaaaata aaacagaata tgaagaagcc caggatgcca ttgttaaaga
1681 aattgtcaat atttcttcag gctatgtaga accaatgcag acactcaatg atgtgttagc
1741 tcagctagat gctgttgtca gctttgctca cgtgtcaaat ggagcacctg ttccatatgt
1801 acgaccagcc attttggaga aaggacaagg aagaattata ttaaaagcat ccaggcatgc
1861 ttgtgttgaa gttcaagatg aaattgcatt tattcctaat gacgtatact ttgaaaaaga
1921 taaacagatg ttccacatca ttactggccc caatatggga ggtaaatcaa catatattcg
1981 acaaactggg gtgatagtac tcatggccca aattgggtgt tttgtgccat gtgagtcagc
2041 agaagtgtcc attgtggact gcatcttagc ccgagtaggg gctggtgaca gtcaattgaa
2101 aggagtctcc acgttcatgg ctgaaatgtt ggaaactgct tctatcctca ggtctgcaac
2161 caaagattca ttaataatca tagatgaatt gggaagagga acttctacct acgatggatt
2221 tgggttagca tgggctatat cagaatacat tgcaacaaag attggtgctt tttgcatgtt
2281 tgcaacccat tttcatgaac ttactgcctt ggccaatcag ataccaactg ttaataatct
2341 acatgtcaca gcactcacca ctgaagagac cttaactatg ctttatcagg tgaagaaagg
2401 tgtctgtgat caaagttttg ggattcatgt tgcagagctt gctaatttcc ctaagcatgt
2461 aatagagtgt gctaaacaga aagccctgga acttgaggag tttcagtata ttggagaatc
2521 gcaaggatat gatatcatgg aaccagcagc aaagaagtgc tatctggaaa gagagcaagg
2581 tgaaaaaatt attcaggagt tcctgtccaa ggtgaaacaa atgcccttta ctgaaatgtc
2641 agaagaaaac atcacaataa agttaaaaca gctaaaagct gaagtaatag caaagaataa
2701 tagctttgta aatgaaatca tttcacgaat aaaagttact acgtgaaaaa tcccagtaat
2761 ggaatgaagg taatattgat aagctattgt ctgtaatagt tttatattgt tttatattaa
2821 ccctttttcc atagtgttaa ctgtcagtgc ccatgggcta tcaacttaat aagatattta
2881 gtaatatttt actttgagga cattttcaaa gatttttatt ttgaaaaatg agagctgtaa
2941 ctgaggactg tttgcaattg acataggcaa taataagtga tgtgctgaat tttataaata
3001 aaatcatgta gtttgtgg
//