LOCUS AK304481 2020 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51470 complete cds, highly similar to Homo
sapiens SCY1-like 3 (SCYL3), transcript variant 1, mRNA.
ACCESSION AK304481
VERSION AK304481.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2020)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2020
/clone="TUTER2002873"
/clone_lib="TUTER2"
/db_xref="H-InvDB:HIT000499105"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="uterus, tumor tissue"
CDS 877..1881
/codon_start=1
/note="highly similar to Homo sapiens SCY1-like 3
(SCYL3), transcript variant 1, mRNA"
/protein_id="BAG65292.1"
/transl_table=1
/translation="MVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSIVAITLH
SLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKNTDLSLEGDPFSQPIKFPINGLSDVK
NTSEDSENFPSSSKKSEEWPDWSEPEEPENQTVNIQIWPREPCDDVKSQCTTLDVEES
SWDDCEPSSLDTKVNPGGGITATKPVTSGEQKPIPALLSLTEESMPWKSSLPQKISLV
QRGDDADQIEPPKVSSQERPLKVPSELGLGEEFTIQVKKKPVKDPEMDWFADMIPEIK
PSAAFLILPELRTEMVPKKDDVSPVMQFSSKFAAAEITEGEAEGWEEEGELNWEDNNW
"
BASE COUNT 581 a 421 c 457 g 561 t
ORIGIN
1 tatttgtaaa agccaccgac atgtgccata ttctaacctt tttaaaaatt tttgctcatt
61 ttaatgtttt acaatcttca acaaattcta ttcactaata gtgttaagaa tctatacatt
121 catgtgtggt ggtctgaaga tagatttgag tataataaat acaaacatgg gagaaggtgc
181 ttcagagaaa attagaaatg gcttataagg cagatcctct agttttaatt gtcttcactg
241 cttttagtct ccagaattca caactctccc agagtgtcat ggacatgccc gggatgcctt
301 ttcatttgga acattggtgg aaagtttgct cacaatctta aatgaacagg gttggttttt
361 gctctcggca gtctccagct atagaggtcc tgaaaagagg gagaaggcat tggaaactaa
421 ctgtagctct ggatttcagt ttcagcggat gttctctcca gctttcaaca gaccttgcac
481 tcaactttgc tgaatcccat tccaaaatgt cggccagcgc tctgcacctt actatctcat
541 gacttcttca gaaatgattt tctggaagtt gtgaatttct tgaaaagttt aacattgaag
601 agtgaagagg agaaaacgga attctttaaa tttctgctgg acagagtcag ctgcttgtca
661 gaggaattga tagcttcaag gttggtgcct cttctgctta atcagttggt gtttgcagag
721 ccagtggctg ttaagagttt tcttccttat ctgcttggcc ccaaaaaaga tcatgcgcag
781 ggagaaactc cttgcttgct ctcaccagcc ctgttccagt cacgggtgat ccccgtgctt
841 ctccagttgt ttgaagttca tgaagagcat gtgcggatgg tgctgctgtc tcacatcgag
901 gcctacgtgg agcacttcac tcaggagcag ctgaagaaag tcatcttgcc acaggttttg
961 ctgggcctgc gtgatactag cgattccatt gtggcaatta ctctgcatag cctagcagtg
1021 ctggtctctc tgcttggacc agaggtggtt gtgggaggag aacgaaccaa gatcttcaaa
1081 cgcactgccc caagttttac taaaaatact gacctttctc tagaaggcga tccattttct
1141 cagcctatta aatttcccat aaatggactc tcagatgtaa aaaatacttc ggaggacagt
1201 gaaaacttcc catcaagttc taaaaagtct gaggagtggc ctgactggag tgaacctgag
1261 gagcctgaaa atcaaactgt caacatacag atttggccta gagaaccttg tgatgatgtc
1321 aagtcccagt gcactacctt ggatgtggaa gagtcatctt gggatgactg cgagcccagc
1381 agcttagata ctaaagtaaa cccaggaggt ggaatcactg ctacaaaacc tgttacctca
1441 ggggagcaga agcctattcc tgctttgctt tcactcactg aagagtctat gccttggaaa
1501 tcaagcttac cccaaaagat tagccttgta caaagggggg atgacgcaga ccaaatcgag
1561 ccgccaaaag tgtcatcaca agaaaggccc cttaaggttc catcagaact tggtttagga
1621 gaggaattca ccattcaagt aaaaaagaag ccagtaaaag atcctgagat ggattggttt
1681 gctgatatga tcccagaaat taagccttct gctgcttttc ttatattacc tgaactgagg
1741 acagaaatgg tcccaaaaaa ggatgatgtc tccccagtga tgcagttttc ctcaaaattt
1801 gctgcagcag aaattactga gggagaggct gaaggctggg aagaagaagg ggagctgaac
1861 tgggaagata ataactggtg acaatagatg tgagttaaac tttaggaaaa aggattccct
1921 ttttttaaaa aaaatcaata cctcaaaagc aggctttggg acaagaaaac cccaaagtgg
1981 cctgcttttc ccatcccagg agctcattat ccagtctgtg
//