LOCUS AK304428 2819 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50043 complete cds, highly similar to Homo
sapiens zinc finger, FYVE domain containing 26 (ZFYVE26), mRNA.
ACCESSION AK304428
VERSION AK304428.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2819)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2819
/clone="TRACH3036913"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000499052"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 136..2511
/codon_start=1
/note="highly similar to Homo sapiens zinc finger, FYVE
domain containing 26 (ZFYVE26), mRNA"
/protein_id="BAG65255.1"
/transl_table=1
/translation="MNHPFGKEEAASQKQLFGFFCECLRRGEWELAQACVPQLQEGQG
DIPKRVEDILQALVVCPNLLRCGQDINPQRVAWVWLLVLEKWLAREKKLLPVVFRRKL
EFLLLSEDLQGDIPENILEELYETLTQGAVGHVPDGNPRRESWTPRLSSEAVSVLWDL
LRQSPQPAQALLELLLEEDDGTGLCHWPLQNALVDLIRKALRALQGPDSVPPGVVDAI
YGALRTLRCPAEPLGVELHLLCEELLEACRTEGSPLREERLLSCLLHKASRGLLSLYG
HTYAEKVTEKPPRATASGKVSPDHLDPERAMLALFSNPNPAEAWKVAYFYCLSNNKHF
LEQILVTALTLLKEEDFPNLGCLLDREFRPLSCLLVLLGWTHCQSLESAKRLLQTLHR
TQGPGCDELLRDACDGLWAHLEVLEWCIQQSSNPIPKRDLLYHLHGGDSHSVLYTLHH
LTNLPALREEDVLKLLQKVPAKDPQQEPDAVDAPVPEHLSQCQNLTLYQGFCAMKYAI
YALCVNSHQHSQCQDCKDSLSEDLASATEPANDSLSSPGAANLFSTYLARCQQYLCSI
PDSLCLELLENIFSLLLITSADLHPEPHLPEDYAEDDDIEGKSPSGLRSPSESPQHIA
HPERKSERGSLGVPKTLAYTMPSHVKAEPKDSYPGPHRHSFLDLKHFTSGISGFLADE
FAIGAFLRLLQEQLDEISSRSPPEKPKQESQSCSGSRDGLQSRLHRLSKVVSEAQWRH
KVVTSNHRSEEQPSRRYQPATRHPSLRRGRRTRRSQAGNLKSSFPCTRQVV"
BASE COUNT 702 a 744 c 709 g 664 t
ORIGIN
1 ggctcaaaca tggctgcgct gagagctcta ttgctttggg cgccgggagc aggaggtact
61 ccgcgaatga gaacattgag aatgtgttcg gcataactca tttctttgta tctccctgca
121 ctctgtgctg ggaaaatgaa tcatccattt ggaaaagagg aagctgcttc gcagaagcag
181 ctttttggat ttttctgcga atgcctgcgg aggggagaat gggagctggc acaggcatgt
241 gtacctcagc tacaggaggg acaaggggat atcccaaaga gggtagaaga catacttcag
301 gcattggtgg tgtgtccaaa tctgctgaga tgtgggcagg acatcaaccc tcaaagagta
361 gcctgggtct ggcttcttgt actggagaaa tggttggccc gggaaaagaa gttactccca
421 gttgttttcc ggagaaagct tgagtttctt ttattgtcag aagacctcca aggtgacatt
481 ccagagaaca tcctcgagga gctgtatgag accttaacac agggtgcagt aggccacgtg
541 cctgacggaa atccaaggag ggagagctgg actcctcgtc tcagctccga agctgtctct
601 gtgctctggg atctcctgag gcagtctccc cagccagcac aggccctgct ggagctcctg
661 cttgaggagg atgacggtac tggcctctgt cactggcctc tgcagaatgc actggtggac
721 ctcattcgaa aggcattgcg ggctttgcag ggccctgatt cggtgccccc tggggtagtc
781 gatgccatct atggagccct gcggactctg cgttgccccg cagaaccact tggggttgag
841 ttgcatctcc tgtgtgagga actactagag gcctgcagga ccgaggggag tcccctgcgg
901 gaggagcggc tgctcagctg cctgctgcac aaggccagcc ggggcctgct gtccctgtat
961 ggccatacct atgcagagaa ggtcacagaa aagccaccga gggctacagc ctcgggaaaa
1021 gtctcaccgg atcatctaga tcctgagcgg gcaatgctag ccctgttctc caatcccaac
1081 ccagccgagg cttggaaagt ggcctatttc tactgcctga gcaacaacaa acacttcctc
1141 gagcagattc tggtaacagc actaacattg ttgaaagaag aagacttccc aaatcttggc
1201 tgcctacttg atagagaatt caggcccctc agttgcctgc ttgtactcct gggctggaca
1261 cactgccaga gcctagagtc agccaagagg ctgctccaga ccctgcacag gacccagggc
1321 ccaggctgtg atgagctcct cagggatgcc tgtgatgggt tgtgggctca cctggaggtc
1381 ctggagtggt gcatacagca gagcagcaac cccataccaa agagagatct gttgtatcat
1441 ttacacggtg gagacagcca ctcagtgctc tacactctcc atcaccttac aaaccttcca
1501 gccctcaggg aggaagatgt tctcaagctc ttacagaaag tgccagccaa ggacccccag
1561 caagagcctg atgcagttga tgctccagtc cctgagcacc tgagccagtg tcagaacctg
1621 acactctacc agggcttctg tgccatgaag tatgccatct atgccctctg tgtaaactca
1681 caccagcact cccagtgcca ggactgcaaa gacagcctct ctgaggacct ggcctcagct
1741 acagagccag cgaatgactc tctctcctcc ccaggtgctg caaatctctt ctcaacttac
1801 ctggccaggt gtcaacagta tctgtgcagt attcctgact ctctgtgcct ggagcttctg
1861 gaaaacatct tctcattgct tctcatcacc tctgctgatc ttcacccaga gcctcacttg
1921 cctgaggact atgctgagga tgatgacatt gaggggaaga gcccctcagg tttgaggtcc
1981 ccatcagaga gccctcagca catagcacat cctgaaagga agtcagaacg gggttccctg
2041 ggagtcccaa agacccttgc ttatacaatg ccaagccatg tgaaggcaga gccaaaagac
2101 agttacccag ggcctcatag gcacagcttt ttggacttaa aacactttac tagtggtatc
2161 agtggatttc tggctgatga atttgcaata ggggccttcc tcaggcttct ccaagagcaa
2221 ctggatgaga tcagtagccg cagcccccct gagaagccaa agcaagaaag tcagagctgc
2281 tcaggaagca gagatggact gcagagccgc ctgcatcgac tttccaaggt tgtctctgag
2341 gcccagtgga gacacaaggt ggtgacaagc aaccatcgtt cagaggagca accttcccga
2401 agataccagc ctgccacacg tcaccccagt ctccgccggg gtcgtcggac aagaaggagc
2461 caggcaggta atctgaagag ctcattccca tgcactaggc aagtggtgta atgctgcttg
2521 tctaatactc tttaagaaac agcacatggt caaaaacaac aaaagcgttg taaaattatc
2581 ctattcccac tccctcaagg taacccttgt taatagtttc ctatgtatcc tttcagaaat
2641 tttccatgca atataaacat gtatatcctt ttatatatat acacatgcat tatactatat
2701 attgagaact gcagcttgct tttttcattt atatcctttt atatatacag atgtattata
2761 ctataaattg agaacttttt tcacttacca ttttaaatac tgcttagtat tccattgtc
//