LOCUS AK304343 2227 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54577 complete cds, highly similar to Histone
deacetylase 9.
ACCESSION AK304343
VERSION AK304343.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2227)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2227
/clone="TRACH3028634"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498967"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 166..1854
/codon_start=1
/note="highly similar to Histone deacetylase 9"
/protein_id="BAH14164.1"
/transl_table=1
/translation="MMMPVVDPVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENL
TRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVERHRREQQLPPLRGK
DRGRERAVASTEVKQKLQEFLLIKSATKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQS
SPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRK
DGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHAEQMV
SQQRILIHEDSMNLLSLYTSPSLPNITMGLPAVPSQLNASNSLKEKQKCETQTLRQGV
PLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGFPLHP
QSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQY
QQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVD
DTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII"
BASE COUNT 684 a 522 c 506 g 515 t
ORIGIN
1 agctacgatt ttctctagcc tcaagaagac tgagaccgag ccaaactcct ggccaacgtg
61 ctttgtggat tcacagtgta gcttgagaaa aatgtggatg tgaagtcaga agttcctgtg
121 ggcctggagc ccatctcacc tttagaccta aggacagacc tcaggatgat gatgcccgtg
181 gtggaccctg ttgtccgtga gaagcaattg cagcaggaat tacttcttat ccagcagcag
241 caacaaatcc agaagcagct tctgatagca gagtttcaga aacagcatga gaacttgaca
301 cggcagcacc aggctcagct tcaggagcat atcaagttgc aacaggaact tctagccata
361 aaacagcaac aagaactcct agaaaaggag cagaaactgg agcagcagag gcaagaacag
421 gaagtagaga ggcatcgcag agaacagcag cttcctcctc tcagaggcaa agatagagga
481 cgagaaaggg cagtggcaag tacagaagta aagcagaagc ttcaagagtt cctactgatt
541 aaatcagcaa cgaaagacac tccaactaat ggaaaaaatc attccgtgag ccgccatccc
601 aagctctggt acacggctgc ccaccacaca tcattggatc aaagctctcc accccttagt
661 ggaacatctc catcctacaa gtacacatta ccaggagcac aagatgcaaa ggatgatttc
721 ccccttcgaa aaactgcctc tgagcccaac ttgaaggtgc ggtccaggtt aaaacagaaa
781 gtggcagaga ggagaagcag ccccttactc aggcggaagg atggaaatgt tgtcacttca
841 ttcaagaagc gaatgtttga ggtgacagaa tcctcagtca gtagcagttc tccaggctct
901 ggtcccagtt caccaaacaa tgggccaact ggaagtgtta ctgaaaatga gacttcggtt
961 ttgcccccta cccctcatgc cgagcaaatg gtttcacagc aacgcatcct aattcatgaa
1021 gattccatga acctgctaag tctttatacc tctccttctt tgcccaacat taccatgggg
1081 cttcccgcag tgccatccca gctcaatgct tcgaattcac tcaaagaaaa gcagaagtgt
1141 gagacgcaga cgcttaggca aggtgttcct ctgcctgggc agtatggagg cagcatcccg
1201 gcatcttcca gccaccctca tgttacttta gagggaaagc cacccaacag cagccaccag
1261 gctctcctgc agcatttatt attgaaagaa caaatgcgac agcaaaagct tcttgtagct
1321 ggtggatttc ccttacatcc tcagtctccc ttggcaacaa aagagagaat ttcacctggc
1381 attagaggta cccacaaatt gccccgtcac agacccctga accgaaccca gtctgcacct
1441 ttgcctcaga gcacgttggc tcagctggtc attcaacagc aacaccagca attcttggag
1501 aagcagaagc aataccagca gcagatccac atgaacaaac tgctttcgaa atctattgaa
1561 caactgaagc aaccaggcag tcaccttgag gaagcagagg aagagcttca gggggaccag
1621 gcgatgcagg aagacagagc gccctctagt ggcaacagca ctaggagcga cagcagtgct
1681 tgtgtggatg acacactggg acaagttggg gctgtgaagg tcaaggagga accagtggac
1741 agtgatgaag atgctcagat ccaggaaatg gaatctgggg agcaggctgc ttttatgcaa
1801 caggtaatag gcaaagattt agctccagga tttgtaatta aagtcattat ctgaacatga
1861 aatgcattgc aggtttggta aatggatatg atttcctatc agtttatatt tctctatgat
1921 ttgagttcag tgtttaagga ttctacctaa tgcagatata tgtatatatc tatatagagg
1981 tctttctata tactgatctc tatatagata tcaatgtttc attgaaaatc cactggtaag
2041 gaaatacctg ttatactaaa attatgatac ataatatctg agcagttaat aggctttaaa
2101 tttatcccaa agcctgctac accaattact tctaaagaaa acaaattcac tgttattttg
2161 agtttatgtg ttgagatcag tgactgctgg atagtctccc agtctgatca atgaagcatt
2221 cgattag
//