LOCUS AK304294 2415 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55486 complete cds, highly similar to
Semaphorin-3C precursor.
ACCESSION AK304294
VERSION AK304294.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2415)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2415
/clone="TRACH3025109"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498918"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 80..2389
/codon_start=1
/note="highly similar to Semaphorin-3C precursor"
/protein_id="BAG65151.1"
/transl_table=1
/translation="MLSKKGIFPWILTCISEEMAFRTICVLVGVFICSICVKGSSQPQ
ARVYLTFDELRETKTSEYFSLSHHPLDYRILLMDEDQDRIYVGSKDHILSLNINNISQ
EALSVFWPASTIKVGECKMAGKDPTHGCGNFVRVIQTFNRTHLYVCGSGAFSPVCTYL
NRGRRSEDQVFMIDSKCESGKGRCSFNPNVNTVSVMINEELFSGMYIDFMGTDAAIFR
SLTKRNAVRTDQHNSKWLSEPMFVDAHVIPDGTDPNDAKVYFFFKEKLTDNNRSTKQI
HSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPETHFDELEDVFLLETDNP
RTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKEGPNHQLISYQGRIPYPR
PGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPIHKRPLIVRIGTDYKYTKI
AVDRVNAADGRYHVLFLGTDRGTVQKVVVLPTNNSVSGGLILEELEVFKNHAPITTMK
ISSKKQQLYVSSNEGVSQVSLHRCHIYGTACADCCLARDPYCAWDGHSCSRFYPTGKR
RSRRQDVRHGNPLTRCRGFNLKAYRNAAEIVQYGVKNNTTFLECAPKSPQASIKWLLQ
KDKDRRKEVKLNERIIATSQGLLIRSVQGSDQGLYHCIATENSFKQTIAKINFKVLDS
EMVAVVTDKWSPWTWASSVRALPFHPKDIMGAFSHSEMQMINQYCKDTRQQHQQGDES
QKMRGDYGKLKALINSRKSRNRRNQLPES"
BASE COUNT 724 a 497 c 563 g 631 t
ORIGIN
1 acagttcagg aaacttaaaa ggatggcata tggaagttga gtgaaggaga aagagaggga
61 agtagaaaag aggagaaaaa tgttaagcaa aaaaggtatt ttcccttgga tattaacttg
121 catatctgaa gaaatggcat tccggacaat ttgcgtgttg gttggagtat ttatttgttc
181 tatctgtgtg aaaggatctt cccagcccca agcaagagtt tatttaacat ttgatgaact
241 tcgagaaacc aagacctctg aatacttcag cctttcccac catcctttag actacaggat
301 tttattaatg gatgaagatc aggaccggat atatgtggga agcaaagatc acattctttc
361 cctgaatatt aacaatataa gtcaagaagc tttgagtgtt ttctggccag catctacaat
421 caaagttgga gaatgcaaaa tggctggcaa agatcccaca cacggctgtg ggaactttgt
481 ccgtgtaatt cagactttca atcgcacaca tttgtatgtc tgtgggagtg gcgctttcag
541 tcctgtctgt acttacttga acagagggag gagatcagag gaccaagttt tcatgattga
601 ctccaagtgt gaatctggaa aaggacgctg ctctttcaac cccaacgtga acacggtgtc
661 tgttatgatc aatgaggagc ttttctctgg aatgtatata gatttcatgg ggacagatgc
721 tgctattttt cgaagtttaa ccaagaggaa tgcggtcaga actgatcaac ataattccaa
781 atggctaagt gaacctatgt ttgtagatgc acatgtcatc ccagatggta ctgatccaaa
841 tgatgctaag gtgtacttct tcttcaaaga aaaactgact gacaataaca ggagcacgaa
901 acagattcat tccatgattg ctcgaatatg tcctaatgac actggtggac tgcgtagcct
961 tgtcaacaag tggaccactt tcttaaaggc gaggctggtg tgctcggtaa cagatgaaga
1021 cggcccagaa acacactttg atgaattaga ggatgtgttt ctgctggaaa ctgataaccc
1081 gaggacaaca ctagtgtatg gcatttttac aacatcaagc tcagttttca aaggatcagc
1141 cgtgtgtgtg tatcatttat ctgatataca gactgttttt aatgggcctt ttgcccacaa
1201 agaagggccc aatcatcagc tgatttccta tcagggcaga attccatatc ctcgccctgg
1261 aacttgtcca ggaggagcat ttacacccaa tatgcgaacc accaaggagt tcccagatga
1321 tgttgtcact tttattcgga accatcctct catgtacaat tccatctacc caatccacaa
1381 aaggcctttg attgttcgta ttggcactga ctacaagtat acaaagatag ctgtggatcg
1441 agtgaacgct gctgatggga gataccatgt cctgtttctc ggaacagatc ggggtactgt
1501 gcaaaaagtg gttgttcttc ctactaacaa ctctgtcagt ggcgggctca ttctggagga
1561 gctggaagtc tttaagaatc atgctcctat aacaacaatg aaaatttcat ctaaaaagca
1621 acagttgtat gtgagttcca atgaaggggt ttcccaggta tctctgcacc gctgccacat
1681 ctatggtaca gcctgtgctg actgctgcct ggcgcgggac ccttattgcg cctgggatgg
1741 ccattcctgt tccagattct acccaactgg gaaacggagg agccgaagac aagatgtgag
1801 acatggaaac ccactgactc gatgcagagg atttaatcta aaagcataca gaaatgcagc
1861 tgaaattgtg cagtatggag taaaaaataa caccactttt ctggagtgtg cccccaagtc
1921 tccgcaggca tctatcaagt ggctgttaca gaaagacaaa gacaggagga aagaggttaa
1981 gctgaatgaa cgaataatag ccacttcaca gggactcctg atccgctctg ttcagggttc
2041 tgaccaagga ctttatcact gcattgctac agaaaatagt ttcaagcaga ccatagccaa
2101 gatcaacttc aaagttttag attcagaaat ggtggctgtt gtgacggaca aatggtcccc
2161 gtggacctgg gccagctctg tgagggcttt acccttccac ccgaaggaca tcatgggggc
2221 attcagccac tcagaaatgc agatgattaa ccaatactgc aaagacactc ggcagcaaca
2281 tcagcaggga gatgaatcac agaaaatgag aggggactat ggcaagttaa aggccctcat
2341 caatagtcgg aaaagtagaa acaggaggaa tcagttgcca gagtcataat attttcttat
2401 gtgggtctta tgctt
//