LOCUS AK304287 3174 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54519 complete cds, highly similar to
MMS19-like protein.
ACCESSION AK304287
VERSION AK304287.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3174)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3174
/clone="TRACH3024701"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498911"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 20..2983
/codon_start=1
/note="highly similar to MMS19-like protein"
/protein_id="BAG65145.1"
/transl_table=1
/translation="MAAAAAVEAAAPMGALWGLVHDFVVGQQEGPADQVAADVKSGNY
TVLQVVEALGSSLENPEPRTRARGIQLLSQVLLHCHTLLLEKEVVHLILFYENRLKDH
HLVIPSVLQGLKALSLCVALPPGLAVSVLKAIFQEVHVQSLPQVDRHTVYNIITNFMR
TREEGPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLILSLRAVLASTPRFAEFLLP
LLIEKVDSEVLSAKLDSLQTLNACCAVYGQKELKDFLPSLWASIRREVFQTASERVEA
EGLAALHSLTACLSRSVLRADAEDLLDSFLSNILQDCRHHLCEPDMKLVWPSAKLLQA
AAGASARACDSVTSNVLPLLLEQFHKHSQSSQRRTILEMLLGFLKLQQKWSYEDKDQR
PLNGFKDQLCSLVFMALTDPSTQLQLVGIRTLTVLGAQPDLLSYEDLELAVGHLYRLS
FLKEDSQSCRVAALEASGTLAALYPVAFSSHLVPKLAEELRVGESNLTNGDEPTQCSR
HLCCLQALSAVSTHPSIVKETLPLLLQHLWQVNRGNMVAQSSDVIAVCQSLRQMAKKC
QQDPESCWYFHQTAIPCLLALAVQASMPEKEPSVLRKVLLEDEVLAAMVSVVGTATTH
LSPELAAQSVTHIVPLFLDGNVSFLPENSFPSRFQPFQDGSSGQRRLIALLMAFVCSL
PRNVEIPQLNQLMRELLELSCCHSCPFSSTAAAKCFAGLLNKHPAGQQLDEFLQLAVD
KVEAGLGSGPCRSQAFTLLLWVTKALVLRYHPLSSCLTARLMGLLSDPELGPAAADGF
SLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVL
NRLPKPVLLPELPTLLSLLLEALSCPDCVVQLSTLSCLQPLLLEAPQVMSLHVDTLVT
KFLNLSSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVRKEA
VSARGEWFLLGSPGS"
BASE COUNT 661 a 902 c 833 g 778 t
ORIGIN
1 acggtctcta gttcgcgtta tggccgctgc cgcggctgtg gaggcggcgg cgcctatggg
61 tgccctatgg ggcctcgtgc acgacttcgt cgtgggtcag caagagggcc ccgctgacca
121 ggtggctgca gatgtgaaat ctggcaacta tacagtgtta caagttgtgg aagcccttgg
181 gtcctctcta gagaatccag aaccccgaac tcgggcacga ggaatccagc ttttgtcaca
241 ggtgctactc cactgtcaca ccttgctcct ggagaaggaa gtggtacacc tgatactgtt
301 ctatgagaac cggctgaagg accatcatct tgtgatccca tctgtcctgc agggtttgaa
361 ggcacttagc ctgtgtgtgg ccctgccccc agggctggct gtttctgtgc ttaaagccat
421 cttccaggaa gtgcatgtac agtccctgcc acaggtggac cgacacacag tctacaatat
481 catcaccaat tttatgcgaa cccgggaaga aggacccttt gtggaggagt tgtttgaagt
541 gacatcctgt tatttcccta tcgattttac ccctccacct aatgatcccc atggtatcca
601 gagagaagac ctcatcctga gtcttcgcgc tgtgctggct tctacaccac gatttgctga
661 gtttctgctg cccttgttga ttgagaaagt ggattctgag gttctgagtg ccaagttgga
721 ttctctacag actctgaatg cttgctgtgc tgtgtatgga cagaaggaac tgaaggactt
781 cctccccagc ctttgggctt ctatccgcag agaggtgttc cagacggcaa gtgagcgggt
841 ggaggcagag ggcctggcgg ccctccactc cctgactgcg tgtttgtctc gctctgtgct
901 gagggctgat gctgaggacc tccttgactc cttccttagc aacattctac aggactgcag
961 gcaccacctg tgtgaaccgg acatgaaact ggtgtggcct agtgccaagc tgttgcaggc
1021 agctgcaggt gcatctgccc gggcctgtga ctctgtcacc agcaatgtac tgcctttact
1081 gctggaacag ttccacaagc acagtcagag cagccagcgg cggacaatcc ttgaaatgct
1141 cctgggtttc ttgaagctgc agcagaaatg gagctatgaa gacaaagatc aaaggcctct
1201 gaatggcttc aaggaccagc tgtgctcact ggtattcatg gctctaacag accccagcac
1261 ccagcttcag cttgttggca tccgtacact gacagtcttg ggtgcccagc cagatctcct
1321 atcttatgag gacttggagc tggcagtggg tcacctgtac agactgagct tcctgaagga
1381 ggattcccag agttgcaggg tggcagcact ggaagcatca ggaaccctgg ctgctctcta
1441 ccctgtggcc ttcagcagcc acctcgtacc caagctcgct gaggagctgc gtgtagggga
1501 gtcaaatttg actaacggag atgagcccac ccaatgctcc cggcatctgt gctgtctgca
1561 agccttgtca gctgtatcaa cacatcccag catcgtcaag gagacactgc ctctgctgct
1621 gcagcatctc tggcaagtga acagagggaa tatggttgca caatccagtg acgttattgc
1681 tgtctgtcag agcctcagac agatggcaaa aaaatgtcag caggaccctg agagttgctg
1741 gtatttccac cagacagcta taccttgcct gcttgccttg gctgtgcagg cctctatgcc
1801 agagaaggag ccctcagttc tgagaaaagt actattggag gatgaggtgt tggctgccat
1861 ggtgtctgtc gttggcactg ctacaaccca cctgagccct gagttagctg cccagagtgt
1921 gacacacatt gtgcccctct tcttggatgg caacgtgtcc tttctgcctg aaaacagctt
1981 cccgagcaga ttccagccat tccaggatgg ctcctcaggg cagaggcggc tgattgcact
2041 gcttatggcc tttgtctgct ccctgcctcg aaatgtggaa atccctcagc tgaaccaact
2101 catgcgggag cttttggaac tgagctgctg ccacagctgc cccttttctt ccaccgctgc
2161 tgccaagtgc tttgcaggac tcctcaacaa gcaccctgca gggcagcagc tggatgaatt
2221 cctacagcta gctgtggaca aagtggaggc tggcctgggc tctgggccct gtcgtagtca
2281 ggccttcact cttcttctct gggtaacaaa ggccctagtg ctcagatacc atcctctcag
2341 ctcctgcctt acagcccggc tcatgggcct cctgagtgac ccagaattag gtccagcagc
2401 agctgatggc ttctctctgc tcatgtctga ctgcactgat gtgctgactc gtgctggcca
2461 tgctgaagtg cggatcatgt tccgccagcg gttcttcaca gataatgtgc ctgctttggt
2521 ccagggcttc catgctgctc cccaagatgt gaagccaaac tacttgaagg gtctttctca
2581 tgtacttaac aggctgccca agcctgtact cttgccagag ctgcccacgc ttctttcctt
2641 gctgctggag gccctgtcct gccctgactg tgtggtgcag ctctccaccc tcagctgcct
2701 tcagcctctt ctactggaag caccccaagt catgagtctt cacgtggaca ccctcgtcac
2761 caagtttctg aacctcagct ctagcccttc catggctgtc cggatcgccg cactgcagtg
2821 catgcatgct ctcactcgcc tgcccacccc tgtgctgctg ccgtacaaac cacaggtgat
2881 tcgggcctta gccaaacccc tggatgacaa gaagagactg gtgcgcaagg aagcagtgtc
2941 agccagaggg gagtggtttc tgttggggag ccctggcagc tgagccctca gtcctggcct
3001 agactgttct gacaatctaa cctgggatta ctaactgttg agccatcttc cccaaagtag
3061 ggaaaccact ggtctctgac tgcctttccc acagacacag cacaaatgct aggcctctgt
3121 tgcatggctg tacaaagaac ataagagtcc atatttctag tggatttgta aaat
//