LOCUS AK304278 3171 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ51189 complete cds, highly similar to Rap
guanine nucleotide exchange factor 4.
ACCESSION AK304278
VERSION AK304278.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3171)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3171
/clone="TRACH3024217"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498902"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 139..2742
/codon_start=1
/note="highly similar to Rap guanine nucleotide exchange
factor 4"
/protein_id="BAH14148.1"
/transl_table=1
/translation="MLYKKYRQYMAGLLAPPYGVMETGSNNDRIPDKENTPLIEPHVP
LRPANTITKVPSEKILRAGKILRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWMM
QQTPCVHSRTQAVGMWQVLLEDGVLNHVDQEHHFQDKYLFYRFLDDEHEDAPLPTEEE
KKECDEELQDTMLLLSQMGPDAHMRMILRKPPGQRTVDDLEIIYEELLHIKALSHLST
TVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDD
FGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLE
KVPAGNRASNQGNSQPQQKYTVMSGTPEKILEHFLETIRLEATLNEATDSVLNDFIMM
HCVFMPNTQLCPALVAHYHAQPSQGTEQEKMDYALNNKRRVIRLVLQWAAMYGDLLQE
DDVSMAFLEEFYVSVSDDARMIAALKEQLPELEKIVKQISEDAKAPQKKHKVLLQQFN
TGDERAQKRQPIRGSDEVLFKVYCMDHTYTTIRVPVATSVKEVISAVADKLGSGEGLI
IVKMSSGGEKVVLKPNDVSVFTTLTINGRLFACPREQFDSLTPLPEQEGPTVGTVGTF
ELMSSKDLAYQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQFW
VVTEICLCSQLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVSRLALTWEK
LPSKFKKFYAEFESLMDPSRNHRAYRLTVAKLEPPLIPFMPLLIKDMTFTHEGNKTFI
DNLVNFEKMRMIANTARTVRYYRSQPFNPDAAQANKNHQDVRSYVRQLNVIDNQRTLS
QMSHRLEPRRP"
BASE COUNT 943 a 695 c 736 g 797 t
ORIGIN
1 tttctgtgga ctgagagcca ctcagtagta gacacgaaca gggaatgaac ggcaatgaag
61 gtacattttg ctgatcaaat aaaggataga tgctcactgg atgtctgata actttgagag
121 accgaaaaag aaggacgtat gctctacaag aaatatcgac agtatatggc aggacttctg
181 gctcctcctt atggtgttat ggaaacgggc tctaacaatg acaggattcc tgacaaggag
241 aacacacctc tcattgaacc tcacgttcct cttcgtcctg ctaacaccat taccaaggtc
301 ccttcagaga agatcctcag agctggaaaa attttacgaa atgccattct ctctcgagca
361 cctcacatga taagagatag aaaataccac ctaaagacat acagacaatg ctgtgtggga
421 actgaactgg tggactggat gatgcagcag acaccatgtg ttcactcccg gactcaagct
481 gttggcatgt ggcaagtcct gttagaagat ggtgttctca accacgtgga ccaggagcac
541 catttccaag acaaatattt attctatcga tttctggatg atgagcacga ggatgcccct
601 ttgcctactg aggaggagaa gaaggagtgt gatgaggagc tccaggacac catgctgctg
661 ctgtcacaga tgggccccga cgcccacatg aggatgatcc ttcgcaaacc acctggccag
721 aggactgtgg atgacctaga gattatctat gaggagcttc ttcatattaa agccttatcc
781 catctttcta ccacagtgaa acgagagtta gcaggtgttc tcatttttga gtctcacgcc
841 aaaggaggga ctgtgttgtt taaccagggg gaagaaggta cctcctggta cattattcta
901 aaaggatcag tgaatgtagt catttacggc aagggtgtgg tctgcaccct gcatgaagga
961 gatgacttcg gcaagttagc actagtgaat gatgccccac gagctgcctc tatcgtctta
1021 cgagaagata actgccattt cttaagagta gacaaggagg atttcaaccg gatcctaagg
1081 gacgtggagg cgaatacagt cagacttaaa gaacatgacc aagatgtctt ggtgctggag
1141 aaggtcccag cagggaacag agcttctaat caaggaaact cacagcctca gcaaaagtat
1201 actgtgatgt caggaacacc tgaaaaaatt ttagagcatt ttctagaaac aatacgcctt
1261 gaggcaactt taaatgaagc aacagattct gttttaaatg actttattat gatgcactgt
1321 gtttttatgc caaataccca gctttgcccg gcactggtgg cccactacca cgcacagcct
1381 tcacaaggta cagaacagga gaaaatggat tatgccctca acaataagag gcgagtcatc
1441 cgcctggttc tacagtgggc tgccatgtat ggagacctcc tgcaagagga tgacgtgtct
1501 atggccttcc tggaggagtt ttatgtatct gtatcagatg atgcccggat gattgctgcc
1561 ctcaaggagc aactgccaga gttggagaag attgtcaagc aaatctcaga agatgcaaag
1621 gcaccacaaa agaagcacaa ggttcttttg caacagttca atacgggcga tgagagagcc
1681 cagaagcgcc agcctatccg cggctctgat gaagttctgt ttaaggtcta ttgcatggac
1741 cacacctaca caaccattcg ggtgccagtg gccacttcgg tgaaggaagt catcagtgca
1801 gttgccgaca agctgggctc cggggagggc ctgatcatag tcaagatgag ttccggagga
1861 gaaaaggtgg tgctcaaacc taatgatgtt tcagtattta cgacgctcac cattaatgga
1921 cgcctgtttg cttgcccgcg agagcaattc gattcactga ctcccttacc agaacaggaa
1981 ggcccaactg ttggaacagt gggaactttt gaactgatga gctccaaaga tttagcatac
2041 cagatgacaa tttatgattg ggaactcttc aactgcgtgc atgagctgga gctaatctat
2101 cacacatttg gaaggcataa ttttaaaaag accacagcaa acttggattt gttcctgagg
2161 agatttaatg aaattcagtt ttgggtcgtc actgagatct gcctttgttc tcagctcagc
2221 aagcgtgttc agctattaaa aaaatttatt aagatagcag cccactgtaa ggagtataaa
2281 aatttgaatt ccttttttgc catcgtcatg ggactaagta acgttgctgt gagccgcttg
2341 gcactaacgt gggagaaact gccaagcaag ttcaagaagt tctatgcgga gtttgaaagt
2401 ttaatggacc cttcaaggaa ccacagggcc tacaggctga cagtagctaa gctggaacct
2461 cctctcatcc ccttcatgcc tttgctcatt aaagatatga catttactca tgaggggaac
2521 aagacgttca ttgacaatct agtaaacttt gaaaaaatgc gcatgattgc aaatacggcc
2581 agaacagtga gatactacag gagccaaccc ttcaatcctg atgcagctca agctaataag
2641 aaccatcagg atgtccggag ttatgtacgg caattaaatg tgattgacaa ccagagaact
2701 ttatcacaga tgtcacacag attagagcct cgtcgaccat agacatttca aatgcccaaa
2761 gcaacagttt gtctccagtc cacaatcttt caaaaatgcc atttatgcta ctactgactg
2821 tattgccact agagaattct acaaaacaag caaaaacaca tcctgagaca cctcagggct
2881 gcattcagct taccagctac ctagcaagag aaggaattat ttgacatgcc taaagcttac
2941 acactctagc ttaggaatcc ccagtttgtg gctatcctgt ttcatttcca cttgtgccat
3001 cttctttgct gaagtgttga ataaggccca cgtgaagagt ttggtagaaa tagccttgtc
3061 aagagaacta gcaagcccct gacatttttt tctaagagtg tttatgggat gagatgtgct
3121 acaaatggga tagatttgga taaaatttta actcaacatc ttgatttgga g
//