LOCUS AK304275 2529 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56206 complete cds, highly similar to Homo
sapiens nuclear protein UKp68 , transcript variant 1, mRNA.
ACCESSION AK304275
VERSION AK304275.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2529)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2529
/clone="TRACH3024033"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498899"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 97..2289
/codon_start=1
/note="highly similar to Homo sapiens nuclear protein
UKp68 , transcript variant 1, mRNA"
/protein_id="BAG65136.1"
/transl_table=1
/translation="MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQ
DQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNF
SRGDERRHEAAVPPLAIPSARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVK
PLREPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPP
ASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPF
FRNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSV
PAKPERRPSLPPSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQE
ELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMS
QDYYDMESMVHADTRSFILKKPKLSEEVVVAPNQESGMKTADSLRVLSGHLMQTRDLV
QPDKPASPKFIVTLDGVPSPPGYVSDQEEDMCFEGMKPVNQTAASNKGLRGLLHPQQL
HLLSRQLEDPNAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCK
FAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAPPSSSQLCRYFPAC
KKMECPFYHPKHCRFNTQCTRPDCTFYHPPINVPPRHALKWIRPQTSE"
BASE COUNT 789 a 559 c 566 g 615 t
ORIGIN
1 gaggcggtgg tgtcccggct gcggggtagg agtccgcggc agcctccggg taagccaagc
61 gccgcgcagt gctgagttcc cgcacgccgc agagccatgg agatcggcac cgagatcagc
121 cgcaagatcc ggagtgccat taaggggaaa ttacaagaat taggagctta tgttgatgaa
181 gaacttcctg attacattat ggtgatggtg gccaacaaga aaagtcagga ccaaatgaca
241 gaggatctgt ccctgtttct agggaacaac acaattcgat tcaccgtatg gcttcatggt
301 gtattagata aacttcgctc tgttacaact gaaccctcta gtctgaagtc ttctgatacc
361 aacatctttg atagtaacgt gccttcaaac aagagcaatt tcagtcgggg agatgagagg
421 aggcatgaag ctgcagtgcc accacttgcc attcctagcg cgagacctga aaaaagagat
481 tccagagttt ctacaagttc gcaggagtca aaaaccacaa atgtcagaca gacttacgat
541 gatggagctg caacccgact aatgtcaaca gtgaaacctt tgagggagcc agcaccctct
601 gaagatgtga ttgatattaa gccagaacca gatgatctca ttgacgaaga cctcaacttt
661 gtgcaggaga atcccttatc tcagaaaaaa cctacagtga cacttacata tggttcttct
721 cgcccttcta ttgaaattta tcgaccacct gcaagtagaa atgcagatag tggtgttcat
781 ttaaacaggt tgcaatttca acagcagcag aatagtattc atgctgccaa gcagcttgat
841 atgcagagta gttgggtata tgaaacagga cgtttgtgtg aaccagaggt gcttaacagc
901 ttagaagaaa cgtatagtcc gttctttaga aacaactcgg agaaaatgag tatggaggat
961 gaaaactttc ggaagagaaa gttgcctgtg gtaagttcag ttgttaaagt aaaaaaattc
1021 aatcatgatg gagaagagga ggaagaagat gatgattacg ggtctcgaac aggaagcatc
1081 tccagcagtg tgtctgtgcc tgcaaagcct gaaaggagac cttctcttcc accttctaaa
1141 caagctaaca agaatctgat tttgaaggct atatctgaag ctcaagaatc cgtaacaaaa
1201 acaactaact actctacagt tccacagaaa cagacacttc cagttgctcc cagaactcga
1261 acttctcaag aagaattgct agcagaagtg gtccagggac aaagtaggac ccccagaata
1321 agtcccccca ttaaagaaga ggaaacaaaa ggagattctg tagaaaaaaa tcaaggaact
1381 caacagaggc aattattatc ccgactgcaa atcgacccag taatggcaga aactctgcag
1441 atgagtcaag attactatga catggaatcc atggtccatg cagacacaag atcatttatt
1501 ctgaagaagc caaagctgtc tgaggaagta gtagtggcac caaaccaaga gtcggggatg
1561 aagactgcag attcccttcg ggtactttca ggacacctta tgcagacacg agatcttgta
1621 caaccagata aacctgcaag tcccaagttt atagtgacgc tggatggtgt ccccagcccc
1681 ccaggatacg tgtcagatca agaggaggac atgtgctttg aaggaatgaa acccgtaaac
1741 caaactgcag cctcaaacaa gggactcaga ggtctcctcc acccacagca gttgcacttg
1801 ctgagcaggc agcttgagga cccaaatgct gagatgagtg aactgagtgt ggcacagaaa
1861 ccagaaaaac ttttggagcg ctgcaagtac tggcctgctt gtaaaaatgg ggatgagtgt
1921 gcctaccatc accccatctc accctgcaaa gccttcccca attgtaaatt tgctgaaaaa
1981 tgtttgtttg ttcacccaaa ttgtaaatat gatgcaaagt gtactaaacc agattgtccc
2041 ttcactcatg tgagtagaag aattccagta ctgtctccaa aaccagttgc accaccagca
2101 ccaccttcca gtagtcagct ctgccgttac ttccctgctt gtaagaagat ggaatgtccc
2161 ttctatcatc caaaacattg taggtttaac actcaatgta caagaccgga ctgcacattc
2221 taccatcccc ccattaatgt cccaccacga catgccttga aatggattcg acctcaaacc
2281 agcgaatagc acccagtcct gcctggcaga agatcatgca gtttggaagt tttcatgtac
2341 tgatgaaaga tactctacag aacttgtcaa atctttgaaa cttggaatat attgctttca
2401 taatatgaag ttttattgcc tatctatctg aagtgtctaa tttttcaagt ttgtaagttt
2461 attatgtggt tttaacattg ggtgtttttg ttttgttttt actatgaaaa gacagcttaa
2521 ggaagagct
//