LOCUS AK304272 3402 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61712 complete cds, highly similar to Mus
musculus PHD finger protein 8 (Phf8), mRNA.
ACCESSION AK304272
VERSION AK304272.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3402)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3402
/clone="TRACH3023538"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498896"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 328..3174
/codon_start=1
/note="highly similar to Mus musculus PHD finger protein
8 (Phf8), mRNA"
/protein_id="BAH14147.1"
/transl_table=1
/translation="MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAAD
IDLYHCPNCEVLHGPSIMKKRRGSSKGHDTHKGKPVKTGSPTFVRELRSRTFDSSDEV
ILKPTGNQLTVEFLEENSFSVPILVLKKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVI
DVTRQADCKMKLGDFVKYYYSGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVEN
LWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANL
TLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNF
LHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGLRENRRHPASY
LVHGGKALNLAFRAWTRKEALPDHEDEIPETVRTVQLIKDLAREIRLVEFNITGACLN
DSDDDSPDLDLDGNESPLALLMSNGSTKRVKSLSKSRRTKIAKKVDKARLMAEQVMED
EFDLDSDDELQIDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEED
YTTDEDMVEGVEGKLGNGSGAGGILDLLKASRQVGGPDYAALTEAPASPSTQEAIQGM
LCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSNSPASQRTPGKRPIKRP
AYWRTESEEEEENASLDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPKKKKNSDDA
PWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKKPL
LKEVEQPRPQDSNLSLTVPAPTVAATPQLVTSSSPLPPPEPKQEALSGSLADHEYTAR
PNAFGMAQANRSTTPMAPGVFLTQRRPSVGSQSNQAGQGKRPKKGLATAKQRLGRILK
IHRNGKLLLRQVIVQAECRQAIHEPKLKRRDAHP"
BASE COUNT 838 a 911 c 936 g 717 t
ORIGIN
1 attcgacgcg cgtcgccgta ggggccggaa ctaccggacg agcctccgct gaggcgcttc
61 gcagtcccgg agctagcccg gctgccggcg tgtcgctggg gctgagctcc gcgggcgtgg
121 agtccttgca gcccaaagca tgaggaggtc cctgtaggat tctggactga agacgttctt
181 gtcaggtttg gggcgtgagg aggttcctgt cagttgggga agcgttaaga ttcctctatc
241 gtccagagag gacgcgtgct gccgcctccc gcccctcttg acacgacgaa cctggccggc
301 cgcagaacgc tccagggccg agcgaagatg gcctcggtgc cggtgtattg cctctgccgg
361 ctgccttacg atgtgacccg cttcatgatc gagtgtgaca tgtgccagga ctggtttcat
421 ggcagttgtg ttggtgttga agaggagaag gctgctgaca ttgacctcta ccactgcccc
481 aactgtgaag tcttgcatgg gccctccatt atgaaaaaac gccgtggatc ttcaaagggg
541 catgatacac acaaggggaa accagtgaag accgggagcc ctacgttcgt cagagagctc
601 cggagtagga cttttgacag ctcagatgaa gtgattctga agcccactgg aaatcaactg
661 accgtggaat tcctggaaga aaatagcttc agtgtgccca tcctggtcct gaagaaggat
721 gggttgggca tgacgctgcc ctcgccatca ttcactgtga gggatgttga acactatgtt
781 ggttctgaca aagagattga tgtgattgat gtgacccgcc aggctgactg caagatgaag
841 cttggtgatt ttgtgaaata ctattacagc gggaagaggg agaaagtcct caatgtcatt
901 agtttggaat tctctgatac cagactttct aaccttgtgg agacaccgaa gattgttcga
961 aagctgtcat gggtcgaaaa cttgtggcca gaggaatgtg tctttgagag acccaatgta
1021 cagaagtact gcctcatgag tgtgcgagat agctatacag actttcacat tgactttggt
1081 ggcacctctg tctggtacca tgtactcaag ggtgaaaaga tcttctacct gatccgccca
1141 acaaatgcca atctgactct ctttgagtgc tggagcagtt cctctaatca gaatgagatg
1201 ttctttgggg accaggtgga caagtgctac aagtgttccg tgaagcaagg acagacactt
1261 ttcattccca cagggtggat ccatgctgtg ctgacgcctg tggactgcct tgcctttgga
1321 gggaacttct tacacagcct taacatcgag atgcagctca aagcctatga gattgagaag
1381 cggctgagca cagcagacct cttcagattc cccaactttg agaccatctg ttggtatgtg
1441 ggaaagcaca tcctggacat ctttcgcggt ttgcgagaga acaggagaca ccctgcctcc
1501 tacctggtcc atggtggcaa agccttgaac ttggccttta gagcctggac aaggaaagaa
1561 gctctgccag accatgagga tgagatcccg gagacagtgc gaaccgtaca gctcattaaa
1621 gatctggcca gggagatccg cctggtggaa ttcaacatca ctggtgcctg cttgaatgac
1681 tcagatgacg actcaccaga cttggacctt gatggaaatg agagcccatt ggccctattg
1741 atgtctaacg gcagtacgaa aagggtgaag agtttatcca aatctcggcg aaccaagata
1801 gcaaagaagg tagacaaggc taggctgatg gcagaacagg tgatggaaga cgaatttgac
1861 ttggattcag atgatgagct gcagattgac gagagattgg gaaaggagaa ggcgaccctg
1921 ataataagac caaaatttcc ccggaaattg ccccgtgcga agccttgctc tgaccccaac
1981 cgagttcgtg aaccaggaga agttgagttt gacattgagg aggactatac aacagatgag
2041 gacatggtgg aaggggttga aggcaagctt gggaatggta gtggcgctgg tggcattctt
2101 gatctgctca aggccagcag gcaggtgggg ggacctgact atgctgccct caccgaggcc
2161 ccagcttctc ccagcactca ggaggccatc cagggcatgc tgtgcatggc caacctgcag
2221 tcctcatcgt cctcaccggc tacctctagc ctgcaggcct ggtggactgg gggacaggat
2281 cgaagcagtg ggagctccag cagtgggctg ggcacagtgt ctaacagtcc tgcttcccag
2341 cgcaccccag ggaagcggcc catcaagcgg ccagcatact ggagaaccga gagcgaggag
2401 gaggaggaga acgccagtct ggatgaacag gacagcttgg gagcgtgctt caaggatgca
2461 gagtatatct atccttcact ggagtctgat gatgatgacc ctgctttgaa atctcgaccc
2521 aagaaaaaga agaattcaga tgatgctcca tggagtccta aagcccgcgt gaccccaact
2581 ctgccgaagc aggaccgtcc tgtgcgtgag gggacccggg tagcctctat tgagacaggt
2641 ttggctgcag cagctgcaaa gctggcccag caggagctac agaaggccca aaagaagaaa
2701 tatatcaaga agaagccttt gctgaaggag gtagaacagc ctcgccctca agactccaat
2761 ctcagtctga cagtaccagc ccccactgtg gctgccacac cacaacttgt cacctcctcc
2821 tcacccctgc ctcctcctga gcctaaacaa gaggccctgt caggaagtct cgctgaccat
2881 gagtacaccg ctcgtcccaa tgcctttggc atggcccagg caaaccgcag caccacacct
2941 atggcccccg gtgtcttctt gacccagcgg cgcccttcag ttggctccca gagcaatcag
3001 gcaggacaag gaaagcgtcc caaaaagggc ctggccacag caaagcagag actcggccgt
3061 atcctgaaaa tccacagaaa tggcaaacta cttctacgac aggtcatcgt tcaagcagaa
3121 tgcagacagg ccattcacga gcccaagttg aagagaagag acgcccatcc gtgaaggagc
3181 agaccatcca tccgatcctc cccttcccct gtccttcctt cgtggattgt ctccattgtc
3241 cagacagtgc ccccacctcc caccgccttg cctcactggc aatctggact cgatggagaa
3301 catcccccca cctccatttg gcactaccca agtggagtgt acccttgccc tttccacctg
3361 taccacccac tccaacctca ccccagcttg cccaatgctt ct
//