LOCUS AK304270 3253 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58733 complete cds, moderately similar to
Coiled-coil domain-containing protein 39.
ACCESSION AK304270
VERSION AK304270.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3253)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3253
/clone="TRACH3023188"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498894"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 95..2920
/codon_start=1
/note="moderately similar to Coiled-coil
domain-containing protein 39"
/protein_id="BAG65133.1"
/transl_table=1
/translation="MSSEFLAELHWEDGFAIPVANEENKLLEDQLSKLKDERASLQDE
LREYEERINSMTSHFKNVKQELSITQSLCKARERETESEEHFKAIAQRELGRVKDEIQ
RLENEMASILEKKSDKENGIFKATQKLDGLKCQMNWDQQALEAWLEESAHKDSDALTL
QKYAQQDDNKIRALTLQLERLTLECNQKRKILDNELTETISAQLELDKAAQDFRKIHN
ERQELIKQWENTIEQMQKRDGDIDNCALELARIKQETREKENLVKEKIKFLESEIGNN
TEFEKRISVADRKLLKCRTAYQDHETSRIQLKGELDSLKATVNRTSSDLEALRKNISK
IKKDIHEETARLQKTKNHNEIIQTKLKEITEKTMSVEEKATNLEDMLKEEEKDVKEVD
VQLNLIKGVLFKKAQELQTETMKEKAVLSEIEGTRSSLKHLNHQLQKLDFETLKQQEI
MHSQDFHIQQVERRMSRLKGEINSEEKQALEAKIVELRKSLEEKKSTCGLLETQIKKL
HNDLYFIKKAHSKNSDEKQSLMTKINELNLFIDRSEKELDKAKGFKQDLMIEDNLLKL
EVKRTREMLHSKAEEVLSLEKRKQQLYTAMEERTEEIKVHKTMLASQIRYVDQERENI
STEFRERLSKIEKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDCLD
AKINKAEKEIYALENTLQVLNSCNNNYKQSFKKVTPSSDEYELKIQLEEQKRAVDEKY
RYKQRQIRELQEDIQSMENTLDVIEHLANNVKEKLSEKQAYSFQLSKETEEQKPKLER
VTKQCAKLTKEIHLLKDTKDETMEEQDIKLREMKQFHKVIDEMLVDIIEENTEIRIIL
QTYFQQSGLELPTASTKGSRQSSRSPSHTSLSARSSRSTSTSTSQSSIKVLELKFPAS
SSLVGSPSRPSSASSSSSNVKSKKSSK"
BASE COUNT 1279 a 517 c 676 g 781 t
ORIGIN
1 actgtgcagg tgcctgggct tgacgcgggt gctgctcacc cgctgtacaa gaaggcggat
61 ctttgctctg tatcttctct atccgtttgc agtcatgagt agcgaattcc tggctgagct
121 gcactgggag gatgggttcg ccatcccggt ggcgaacgag gagaacaagc tactggaaga
181 tcagttgtca aagctgaagg atgaaagagc aagcttgcaa gatgagttac gtgagtatga
241 agagcgaatt aattctatga cttctcactt caaaaatgtt aagcaagagc tctcaattac
301 acagtctctt tgcaaagcaa gggagcgtga gactgaaagt gaagaacatt ttaaggccat
361 tgctcaaaga gaattgggac gagtgaaaga tgaaattcaa cggctggaaa atgagatggc
421 ttcaatactg gaaaagaaaa gtgataaaga aaatggcata tttaaagcca ctcaaaaatt
481 ggatggtttg aaatgtcaaa tgaactggga ccagcaagca ttggaggcct ggttagaaga
541 atcagctcat aaagatagtg atgctctcac tctccagaag tatgcacaac aagatgataa
601 taaaatcagg gcactgactc tgcaattaga aagactaact ttggaatgta atcagaaaag
661 aaagatactt gacaacgaac ttacagagac tataagcgca cagttagaat tggataaagc
721 agcacaagat tttcgtaaga ttcataatga aagacaagaa ctcattaaac aatgggagaa
781 cacaatagaa cagatgcaga agagggatgg agacatagat aactgtgctt tggaattagc
841 aaggataaag caggaaacga gagaaaaaga aaatttggtt aaagaaaaga tcaagttttt
901 ggaaagtgag attgggaata acacagagtt tgagaaaaga atttctgtgg ctgatcgtaa
961 acttttaaaa tgtagaacgg catatcagga ccatgaaact agtagaattc agctgaaggg
1021 tgagctggat tctttaaaag ccactgtgaa tagaacttcc agtgatttag aagctctgag
1081 gaaaaatatt tccaagataa agaaggacat tcatgaagaa acagcaaggt tacaaaaaac
1141 taaaaatcat aatgagataa tacaaacaaa attaaaggag ataactgaga aaaccatgtc
1201 tgtggaagag aaagctacta atttggaaga tatgctaaag gaggaggaaa aagatgtgaa
1261 ggaagtagat gttcaactga acctcataaa aggtgtgctg tttaagaaag ctcaggagtt
1321 acagactgag acaatgaaag aaaaagctgt tttatcagaa attgaaggaa ctcgttcctc
1381 tctgaaacat ctcaaccatc agttacaaaa actggatttt gaaaccttga agcagcaaga
1441 aattatgcac agtcaggatt ttcacattca acaagtggaa cggagaatgt cacggttaaa
1501 gggagaaatt aattcagaag aaaaacaagc gcttgaagca aaaattgttg aacttaggaa
1561 gtctttggaa gagaaaaaat ctacatgtgg ccttttggaa acacagatca agaagcttca
1621 taatgatctt tattttatca agaaggcaca tagtaaaaac agtgatgaaa aacagtccct
1681 tatgaccaaa ataaatgaac taaacctttt catcgacaga tcagagaaag aacttgataa
1741 agccaaaggt tttaaacagg atttgatgat agaggacaat cttttaaaac ttgaagttaa
1801 gcgtactcga gaaatgcttc acagtaaggc agaagaagtt ctttccctag aaaaaagaaa
1861 acagcaatta tacacagcaa tggaagagcg aactgaagaa atcaaggttc ataaaacaat
1921 gcttgcgtca caaataagat atgttgatca agaacgggaa aacataagca ctgagtttcg
1981 cgagcggcta agtaaaattg agaagctgaa gaatagatat gaaattctga ctgttgttat
2041 gctgcctcct gaaggagaag aggagaaaac acaggcctat tatgtaataa aggctgctca
2101 agaaaaagaa gaacttcaaa gggaaggtga ctgtttggat gccaagatca acaaagctga
2161 aaaagaaatc tacgctctag aaaataccct tcaagtgctg aacagctgta acaacaatta
2221 taagcaatct tttaaaaaag tgactccatc tagtgatgag tatgagctaa aaattcaact
2281 agaagaacaa aaaagagctg ttgatgaaaa atacagatac aaacaaagac aaatcagaga
2341 acttcaagaa gacatccaga gcatggaaaa tacattagat gttatagaac atttagcaaa
2401 taatgttaaa gaaaagttat cagagaagca ggcttattca tttcaactaa gtaaagaaac
2461 ggaggagcag aagccaaaat tagaaagagt gaccaaacag tgtgcaaaac tcacaaagga
2521 aatccatctt ttgaaagaca caaaagatga aacaatggaa gaacaagaca tcaaacttcg
2581 tgaaatgaaa cagtttcaca aagttattga tgaaatgtta gttgatatca tagaagaaaa
2641 tactgagatc cgtattatcc ttcaaacata ctttcaacag agtgggttag aactacctac
2701 agctagcaca aaaggcagtc gtcagagctc tagatctcct tcacatactt cactatcagc
2761 aaggtcatct aggagtacaa gtacatctac ttctcagtct tcaattaaag tactggagct
2821 taaattcccg gcctcctctt cactagtagg cagcccttct aggccatcta gtgctagtag
2881 tagctctagt aatgttaaga gcaaaaagag cagcaaataa acattttaat ctcttctgaa
2941 aaagttgtaa acacaaaaac aaaaatatac tttaaaatac aaaacgaccc aacacatttt
3001 atctagtgga aagtgtaaaa acttagtggt aagtgtaaaa actgatagtt ttaaaaaaaa
3061 aggaacgttc tcattttctc tactgttttc ttcatactga agaaattaat agcagattct
3121 tgacaaggct acatgttata caagcatagg aaaaatgctg tatttcactg taattctgat
3181 gttcgtagtg ttagaaaata gtttgcttca ttatttcacg aaactacact cacttctaat
3241 gtaacaatct ttc
//