LOCUS AK304234 2933 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54322 complete cds, highly similar to Protein
transport protein Sec24B.
ACCESSION AK304234
VERSION AK304234.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2933)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2933
/clone="TRACH3020276"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498858"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 99..2702
/codon_start=1
/note="highly similar to Protein transport protein Sec24B"
/protein_id="BAG65103.1"
/transl_table=1
/translation="MPNSYDALEGGSYPDMLSSSASSPAPDPAPEPDPASAPAPASAP
APVVPQPSKMAKPFGYGYPTLQPGYQNATAPLISGVQPSNPVYSGFQQYPQQYPGVNQ
LSSSIGGLSLQSSPQPESLRPVNLTQERNILPMTPVWAPVPNLNADLKKLNCSPDSFR
CTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRSCRTYINPFVSFI
DQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQP
AVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEG
LSQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPA
LQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKL
ALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFHYTHNPSQAEKLQKD
LKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIE
ESLTDTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANM
AVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSALMAPSSLKLFPLYVLALLK
QKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDRIVP
QPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQKMTHL
PELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAKAEFFQHLIEDRTEAAFSYYE
FLLHVQQQICK"
BASE COUNT 859 a 636 c 578 g 860 t
ORIGIN
1 atcacccagt tgagcctgtg acctcagtta cacagccatc agagctatta caacaaaaag
61 gtgttgacag ctcttctacc acaagcagtg cttctccaat gcccaacagt tatgatgccc
121 tggaaggagg cagttaccca gatatgcttt cttcatcagc aagcagtcct gctcctgatc
181 ccgcccctga acctgatcct gcttctgctc cagctccagc ttcagctcca gctcctgtcg
241 tccctcagcc ttcaaaaatg gctaagcctt ttggctatgg ctatccaaca cttcagcctg
301 gttatcagaa tgctacagca ccacttattt ctggagtaca gcccagtaac ccggtatatt
361 ctggattcca gcagtatcct caacagtatc ctggtgtgaa ccagctatcc tccagtatag
421 gaggattgag tcttcagagt tctccacaac cagaaagcct gagacctgta aaccttactc
481 aggagaggaa tattttacct atgactcctg tttgggctcc tgtacctaac ttgaatgcag
541 acctcaaaaa attaaactgt agcccagatt catttcggtg tactttgaca aatattccac
601 agacacaggc tttactgaat aaagctaagc ttcctttagg attgttgtta catcccttca
661 gagacctaac gcaattacca gtgataacat caaataccat tgtgaggtgc cgatcctgtc
721 gaacgtatat taaccccttt gtatccttca ttgatcaacg tagatggaaa tgcaatttgt
781 gctatagagt aaacgatgtt cctgaagaat ttatgtataa cccccttacc cgatcttatg
841 gagagcctca taaacgacca gaagttcaga attcaactgt ggagttcatt gcttcttcag
901 attacatgct gcgtcctcct caacctgcag tttacttgtt tgttttagat gtgtctcata
961 atgcagtgga agctggatat ttgacaattt tgtgccagtc actcctagaa aatctagaca
1021 agcttcctgg agattcacga acaagaatag gattcatgac ctttgatagc actattcatt
1081 tctacaattt acaagaagga ttatcacagc ctcaaatgtt gattgtgtct gatatagatg
1141 atgtttttct acctacaccg gatagtttac ttgtgaatct atatgaaagt aaagagctta
1201 taaaagactt actgaatgca ttaccaaaca tgttcaccaa tacaagagaa acacacagtg
1261 cccttggtcc tgcacttcag gctgccttta aattaatgtc tccaacaggt ggccgtgtgt
1321 ctgtatttca gacacagtta ccttccttgg gtgcaggact tctgcaatcc agagaagatc
1381 ctaatcagag atcaagtaca aaggtggtac aacatcttgg ccctgcaact gatttttata
1441 agaaacttgc attagattgc tcgggacagc aaactgcagt ggatttgttc cttttaagtt
1501 cacagtattc tgatcttgct tctctagctt gcatgtccaa gtattctgca gggtgcatct
1561 attattatcc atcattccac tatactcaca atccttcaca agcagaaaag ttacaaaaag
1621 acctaaaacg gtatctcaca agaaaaattg ggtttgaagc tgttatgaga ataaggtgta
1681 ctaaaggtct ttcaatgcac acttttcacg gtaacttctt tgtccgttct actgatttgt
1741 tatcccttgc caacatcaat cctgatgctg gatttgcggt gcagttgtca attgaagaaa
1801 gtttaacaga tacttcctta gtatgttttc aaacagccct attatataca tcaagcaaag
1861 gtgagcggag aattagagta catacacttt gtttgccagt ggtaagttca ctagcagatg
1921 tatatgcggg agtggatgta caagctgcca tctgccttct ggcaaacatg gctgtggatc
1981 ggtccgtttc atcaagtctg tcagatgcaa gagatgcctt agtgaatgct gtagtggact
2041 cattgtctgc atatggctca actgtctcaa atttacagca ctctgcattg atggcgccca
2101 gctccctcaa gttgtttcct ctctatgttt tggcccttct caaacagaaa gcatttagaa
2161 cgggtacaag cacacggctg gatgatcgtg tatatgccat gtgtcagata aagtctcagc
2221 cacttgttca tctaatgaaa atgattcatc ccaacttata caggatagac agattgacag
2281 atgagggtgc agtacatgtt aatgacagga ttgtaccaca gccacctctt caaaaattgt
2341 ctgcagagaa gctgacaaga gaaggtgctt tccttatgga ctgtggctct gttttttaca
2401 tttgggttgg gaaaggctgt gacaataact tcatagagga tgtgcttgga tatactaatt
2461 ttgcatcaat accacagaaa atgacacatc ttccagagct agatacactt tcatcagaaa
2521 gagccagatc cttcataact tggcttagag acagcagacc attaagtcca atccttcaca
2581 tagtaaaaga tgagagtcct gccaaagcag aattttttca gcatttgatt gaagaccgga
2641 cagaggctgc attttcttac tatgaatttt tgcttcatgt tcagcagcag atttgtaagt
2701 gaagtagaat aaaattgaat aagaaaaaga tctataacct aggtaaagca taatctgtca
2761 gagaagcgcg tgagaaattt gaaatgaagg catttgttaa tacaagatgc aacgcacagc
2821 actctgtctg aggctttggt aaaaagtaaa ggggaagaaa gaacttgaca gatctttttc
2881 aactcaaatt aatggtaacg atgatgctgt ttcaccaagt atattttgaa ttg
//