LOCUS AK304223 2024 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54237 complete cds, highly similar to
Nucleoporin 50 kDa.
ACCESSION AK304223
VERSION AK304223.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2024)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2024
/clone="TRACH3018638"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498847"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 872..1528
/codon_start=1
/note="highly similar to Nucleoporin 50 kDa"
/protein_id="BAG65095.1"
/transl_table=1
/translation="MEVASEKKTDPSSLGATSASFNFGKKVDSSVLGSLSSVPLTGFS
FSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQAEGDSGECKGGDEEENDEPPKVVVTEV
KEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTANQKTQLLVRADTNLGNILLNVLI
PPNMPCTRTGKNNVLIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKKDA
"
BASE COUNT 578 a 480 c 483 g 483 t
ORIGIN
1 attcgagtta caaaatggcc gcccggagtg tgttcggcgc ggttccccca gctgtctctg
61 gctgaaccgg cgctctcgcc tccctgccga acacagcgtg aggagccccc ccagggacat
121 ggtgtttgag tctctgggct tgccgagcac taagtcctct gagttccgca gcgcagcacc
181 ggaagcggcc gagcgcgctc agcccggcga cccctgcggg ctccagaccc ctgcgccgct
241 gcgccccggg tttcgccgca accaagaccc agcgagtgca gcggcggccg ccgaggaggt
301 tcgaaaacat ggccaaaaga aatgccgaga aggaactgac agataggaat tgggatcaag
361 aagatgaagc tgaagaggtg ggaacattct ccatggccag tgaggaagtc ttgaagaata
421 gagccataaa gaaagcaaag cgcagaaatg ttggatttga agttctcttg ctgcaaatgg
481 ccctaccacc ttggttgata aagtttcaaa tcccaaaact aatggggaca gtcagcagcc
541 ctcctcctct ggccttgctt ccagtaaagc ttgtgtcgga aatgcctatc acaagcagtt
601 ggccgccttg aactgctccg tgcgggattg gatagtgaag cacgtgaata caaaccccct
661 ctgtgatctg acacctatct ttaaagacta tgagaaatat ttagcaaaca ttgaacagca
721 acacgggaac agtggcagga attctgaaag tgaatctaac aaagtggcag ctgaaacaca
781 gtctccttcc ctttttggct caacaaaatt acagcaagag tcaacgtttt tgtttcatgg
841 caacaaaact gaagatacac ctgacaagaa gatggaggtg gcatctgaaa agaaaacgga
901 cccatcatca ctaggagcga caagtgcctc atttaatttc ggcaagaaag ttgatagctc
961 tgttttgggc tcattaagct ctgtccccct gactggattt tctttctccc ctggaaactc
1021 cagtttattt ggcaaagata ctacccagag taaaccagtc tcttcaccat ttcccactaa
1081 accattggag ggccaagcag aaggtgacag tggtgaatgc aaaggtggag atgaagaaga
1141 gaatgatgag ccacccaaag tagtagttac cgaagtaaaa gaagaagacg ctttttactc
1201 caaaaagtgt aaactgtttt acaagaaaga caatgagttt aaagagaaag gcataggtac
1261 tctgcattta aaacctacag caaatcagaa gacacagctt ttggtgcggg cagacaccaa
1321 tttaggcaac atattgctga acgttctgat tccacccaat atgccatgta cgcgaacagg
1381 gaagaataac gttcttatcg tctgtgttcc aaatccacca attgacgaga agaatgccac
1441 catgccagtc accatgttga ttcgggtaaa aaccagcgag gatgcagacg agttgcacaa
1501 aattttactg gagaaaaagg atgcctgaac acgcaaagtc ggctgcagaa ttattgccaa
1561 gttgctgctg cttccaccgc cccttagtca gtttttcttc tcttctttga cattctaaga
1621 acttatagat aacttaaaac ttttgtgagg aagattaatg tggccaataa aacctttaaa
1681 tgttaagtgt caagaaactg cactctccct tcttaagaac tgcctaaagt gtaaaataca
1741 tttgaatgca atttttggaa gattttttaa tgttcgttta ttaaactaac cctaagtgat
1801 ttcttcaagg actgcaatca gggtatcaat ttgctttccc aaaggctctt ccaacccgtg
1861 ggttttgggg tccaccgcca ccaccagaga ggcttttgaa caggtgcctg gctgtgttca
1921 gaaggaagct ggcctgtgtg cttctctccg gtgggctcag ccgacgtgtg agacttgttc
1981 tgttaccaaa tgaaccgggc tgccacgctg tgacaggcgt ttgt
//