LOCUS AK304212 3894 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59291 partial cds, highly similar to Slp
homolog lacking C2 domains b.
ACCESSION AK304212
VERSION AK304212.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3894)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3894
/clone="TRACH3017893"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498836"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 319..>3894
/codon_start=1
/note="highly similar to Slp homolog lacking C2 domains b"
/protein_id="BAG65085.1"
/transl_table=1
/translation="MREESGMPPPWDASLLENEFFQVLDDLDSKLAQEQSASSVNTRT
PLNYGSRTQFGHFYSSGNRHGNITERHKKHYNETSNMSIYDILRPGTPREGFKTFSPR
TSTIYDMYRTREPRVFKEDYVQKNTFGSTSLCFDSRQRSALPATGHFTARSLHFPATT
QSKSGFIPPRHQQSPKRTPLSSIIWNRSDSSRDRENQEEFLRAPSPMEIDPADKYVYP
RGFQENKRYESYHSQNVYQRVSLNAPMENAMSPDTFENSENMPFYHQSNTFTRSFFSN
TFGRSGEQRRFGQGPFWGQEKGHSFWSDFHRSRKSFSSSDRDFEMISMEANIVSAIHG
HNVSSEHWESFSSGYGTDVSRGQEEPHPWQFDFQRSTLDSMVVSHGNETQLTPHFGTP
NVCSMTGSSYHVKSSELVSQQDSSPVEVHINKEASSFGIAQTLASSFKTSFSQISDDR
RNPQSPNLQNPTVTLQKIFPNKPASHPMRSHTEVTVTSSNSVDSLPLAKSQPNILVTE
VNNEKDLNESISEEDKQLSKMDQTNKAGEIPQPVSQTGISNSLPDFQNPLSQDSAKSN
GFGFNASTIISSKKSPRVFSRKDTSKMYIPHTDKSNDIKQDKRFTENRKLGSTASLPF
IQEHRTPPSFPRTDQGCHQELTVNNEDISRIITNNHWSSALTDTQNAQYSKCKLTPGH
KTSCDSLDLSSAALPDSSPSKNSSLDAPVVPSTTVFSRRSPSDKDPSLGEREEKDNAG
KNQKNQFIVSHSENQERNDSPVPTHDEVVDVKCHSHSPFRNERGKGKIRHHISCIEKL
SKTESISVPTSDHRSLIEANQSNSKVSELDTIYCTLPRKSSSFLIHGRQSGSKIMAAS
LRNGPPPFQIKNNVEDAMGNYMLNKFSPSSPESANECSKVLSDSALEAPEATERMTNV
KSSGSTSVRKGPLPFLINRAMSCPSGEPHASTGREGRKKPLTSGMDASELTPRAWERI
ISPVESDSSVRDCSLTKRQHQKENFQEYTEKEGKMAASRRSVFALSNEDPLPFCSDLS
GKERGKTLHKVKTTSTFSVSGDEDNVKCLEVVSIYYTLPRKPSKKFCNLLQQYTQNTN
LLIESPQVETETFPNALEKDKQNYSTREQSGTPSCENLKMSVNSDQTLTTENMTAFRL
SNRGPLAPTLQEMASVEAAVSLPEEESKAREIFSDNLAKTPLGDSE"
BASE COUNT 1293 a 850 c 779 g 972 t
ORIGIN
1 aaaataaaag gtgttggagg tcactgtcgc tgagaaacaa gaggcagcaa gcagctggtg
61 ggttgtgtga tgaggctgct ggatttaaca gaccactgtc ctcccctctt gggtgaatgg
121 agggtttttc acttccagct ttcacccgag gctgtttttg tctgatgaaa gaaagagcag
181 accacaatgt agatttatgt gactgtagct accagagtca ctagcaagga aatactcttc
241 aaatagcagg caaaaatata caattcacct ctggaaaatc atctagttga cagtacattt
301 gtcccaaagc cagcagtcat gagggaggag agtggcatgc ctccaccgtg ggatgcttca
361 ctgctggaga atgagttttt ccaagtttta gatgacttgg atagcaaatt ggctcaggaa
421 cagtctgcaa gctcagtgaa taccagaaca cccctcaact atggatcaag aacacagttc
481 ggtcactttt attccagtgg taacagacat ggtaatatca cagaaaggca caaaaaacac
541 tataatgaaa cttccaatat gtctatctat gacatcctaa gaccaggaac tcctagggaa
601 ggttttaaaa ccttttctcc taggacaagc acaatttatg atatgtatag gacaagggag
661 cccagagtct ttaaagaaga ttatgtgcaa aagaatactt ttggcagtac ttcgctgtgt
721 tttgacagca ggcaacggtc ggccttacca gccacagggc atttcacagc aagaagctta
781 cattttccag ccacaactca gagcaagagt gggtttatac caccaaggca ccagcagagt
841 ccaaagagaa ctcctttatc atccatcata tggaacagat cagattcctc tagagacagg
901 gagaaccagg aagagttcct gagggcacca tcaccaatgg aaattgatcc cgctgacaag
961 tatgtgtatc ccaggggttt tcaggagaat aagagatatg aatcgtacca ttcacagaat
1021 gtttaccaac gtgttagttt aaatgctccc atggagaatg caatgagtcc cgacactttt
1081 gagaactcag agaacatgcc attctaccat caaagcaaca catttaccag atctttcttc
1141 agcaatacct ttggacgaag cggagaacag aggagatttg gacaaggtcc tttttggggc
1201 caagagaaag gacattcttt ctggtctgac tttcatcgaa gcaggaaatc attcagttct
1261 tctgacagag actttgaaat gatttccatg gaagcaaata ttgtatcagc cattcatggc
1321 cataatgttt cttctgaaca ctgggaatca ttttcttctg gttatggaac agatgtttcc
1381 agaggccaag aagagccaca tccttggcag tttgattttc agagatccac actggatagc
1441 atggtggtat cacatggtaa tgagacccag ttgactcctc attttggcac accaaatgtt
1501 tgctccatga ctggttcaag ctatcacgtc aaatctagtg agttggtaag tcaacaggac
1561 agttctcctg tagaagtaca tataaacaaa gaagcttcct catttggaat tgctcagact
1621 ctagcatcct cattcaaaac ttccttttcc cagatttctg atgacagaag gaatcctcag
1681 agtcccaact tgcagaatcc cacagtcact ttgcagaaaa tttttccaaa taagcctgcc
1741 tctcatccaa tgagaagcca tacagaagtc actgtgacca gcagcaattc agttgactct
1801 ctgcctcttg ccaaaagcca gcccaatatc ttggtcacag aagtaaataa tgagaaagac
1861 ttaaatgaat ctatttcaga agaagacaaa cagctaagca agatggacca gacaaacaag
1921 gcaggtgaaa taccccaacc tgtttcacag acagggatct caaactcttt acctgatttt
1981 caaaatccct tatcccagga ctcagccaag agcaacgggt ttggttttaa tgcatctacc
2041 ataataagtt caaaaaagtc acccagagtc ttttccagga aagatacctc caaaatgtat
2101 ataccgcaca cagataaatc caatgacatt aaacaagata agaggtttac tgaaaacaga
2161 aaacttggct caacagcttc ccttcctttc attcaggaac acagaacacc accatctttc
2221 cccaggacag accaaggttg tcaccaggaa ttaactgtaa ataatgaaga tatttcaaga
2281 attattacaa ataaccactg gagctctgca ctgactgata ctcaaaatgc acaatactca
2341 aaatgcaagt taactcctgg ccacaagacc tcgtgtgatt ctttagatct gtcatcagct
2401 gcactaccag attcctcacc atcaaagaat tcttcccttg atgctcctgt ggttccatct
2461 actacagtgt tctccaggag aagtccttca gacaaagatc catcgctagg agaaagagaa
2521 gaaaaagaca atgctgggaa gaaccaaaag aatcagttta ttgtaagcca ctcagaaaac
2581 caagagagaa atgatagtcc tgtgcctaca catgatgaag tggttgatgt caaatgccat
2641 tcacactctc cttttaggaa tgaaagagga aaaggaaaaa taaggcatca tatatcctgt
2701 attgaaaagt taagcaaaac agaaagtata tcagtaccca ccagtgatca caggagcctc
2761 attgaagcaa atcaaagcaa ttccaaagtt tctgaacttg acacaattta ttgtaccttg
2821 ccaagaaaat caagcagttt tctcatacat ggcaggcagt caggaagtaa aataatggct
2881 gcttcattga ggaatgggcc acctcccttc caaatcaaaa ataatgtgga agatgcaatg
2941 gggaactata tgttaaacaa atttagtccc agttctcctg agtcagcgaa tgaatgttcc
3001 aaagtccttt cagactcagc cctggaagca cctgaagcca cagagagaat gacaaatgta
3061 aaaagcagtg gatctacttc cgttagaaaa ggaccacttc cattcctcat caacagggct
3121 atgtcatgtc cctcagggga gccacatgcc tcaactggaa gagaaggaag aaaaaagcca
3181 ttgacctcag gcatggatgc ttctgagcta acaccaaggg cttgggagag aatcattagc
3241 cctgtggaaa gtgactcatc tgttagagat tgttctttaa ccaaaagaca acaccaaaag
3301 gaaaacttcc aagaatacac tgagaaagag ggtaaaatgg ctgcctccag gagaagtgta
3361 tttgctcttt caaatgaaga ccctttacct ttttgctcag acttgtcagg aaaagaacgt
3421 gggaaaacat tacataaagt taagacgact agtacgtttt ctgtttctgg tgatgaagat
3481 aatgtaaaat gtctggaggt ggtctcaata tattacactc taccgaggaa acccagcaaa
3541 aaattctgta acctccttca acagtataca caaaatacta atttacttat agaatcacct
3601 caagtggaga ctgaaacatt tcctaacgct ttagaaaaag acaaacagaa ttattctaca
3661 cgagagcagt caggaacacc ttcatgtgaa aatctaaaga tgtccgtcaa ctctgaccag
3721 acgctcacca ctgaaaatat gactgccttc cgattatcaa atagggggcc cctagctcct
3781 acattacagg aaatggcttc tgttgaggca gctgtttctc ttcctgaaga ggaatctaaa
3841 gctagagaga ttttttcaga taatttagct aaaacacctc taggtgattc agaa
//